Fish Spatial Expression Database

GENE ID: ENSDARG00000088540

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000088540 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000016739	lrrc4cb	7: 50053339 ~ 50113581 (+)
ENSDARG00000075173	si:ch1073-322p19.1	3: 1096831 ~ 1106313 (+)
ENSDARG00000052876	CR933791.2	3: 2200895 ~ 2209415 (-)
ENSDARG00000073713	vav3b	2: 15776156 ~ 15945153 (+)
ENSDARG00000074610	si:ch211-113e8.6	1: 40186407 ~ 40189893 (-)
ENSDARG00000058421	lgi1b	12: 5189776 ~ 5204629 (+)
ENSDARG00000011581	si:dkey-23k10.5	15: 36349009 ~ 36357889 (-)
ENSDARG00000058978	zgc:113423	23: 1042624 ~ 1056808 (-)
ENSDARG00000079977	nhsb	11: 29999414 ~ 30090019 (+)
ENSDARG00000014973	ntng1a	24: 29381946 ~ 29529252 (+)
ENSDARG00000042272	tmem231	25: 34845115 ~ 34859819 (+)
ENSDARG00000029232	FO704779.1	25: 7591293 ~ 7601561 (+)
ENSDARG00000034946	NA	--
ENSDARG00000059786	NA	--
ENSDARG00000070516	NA	--
ENSDARG00000036121	NA	--
ENSDARG00000070515	NA	--
ENSDARG00000074598	NA	--
ENSDARG00000075219	NA	--
ENSDARG00000077336	NA	--
ENSDARG00000091208	NA	--
ENSDARG00000063447	NA	--
ENSDARG00000077251	NA	--
ENSDARG00000088540	NA	--
ENSDARG00000093541	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.