Fish Spatial Expression Database

GENE ID: ENSDARG00000068110

Symbol	Location	Gene type	Genome version	Species
CABZ01079818.1	3: 196316 ~ 214709 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000068110 (CABZ01079818.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000013414	lin7a	4: 21751762 ~ 21851473 (-)
ENSDARG00000090815	kcnj10a	7: 6564653 ~ 6604623 (-)
ENSDARG00000031345	NA	5: 43617262 ~ 43682930 (-)
ENSDARG00000025728	grin1b	5: 29597645 ~ 29643930 (-)
ENSDARG00000023759	zgc:73226	5: 6350328 ~ 6377865 (-)
ENSDARG00000041926	dlg4a	5: 68529728 ~ 68641353 (-)
ENSDARG00000068110	CABZ01079818.1	3: 196316 ~ 214709 (-)
ENSDARG00000062217	kcnj3b	6: 13276022 ~ 13308813 (-)
ENSDARG00000078455	best4	2: 26504969 ~ 26509057 (-)
ENSDARG00000061636	kcnj9	2: 48950787 ~ 48966431 (-)
ENSDARG00000077165	kcnj3a	9: 4478199 ~ 4511613 (-)
ENSDARG00000073883	clstn3	16: 12102336 ~ 12173647 (-)
ENSDARG00000089549	baalcb	20: 19579835 ~ 19590378 (-)
ENSDARG00000077114	arhgef16	8: 47099033 ~ 47143828 (+)
ENSDARG00000078187	slc12a5b	8: 37280532 ~ 37391372 (-)
ENSDARG00000044011	xkrx	14: 41318412 ~ 41341284 (+)
ENSDARG00000003210	ano2a	18: 7283283 ~ 7304547 (+)
ENSDARG00000061014	kcnj5	18: 48576527 ~ 48643857 (+)
ENSDARG00000045039	kcnj16	12: 36267761 ~ 36268723 (-)
ENSDARG00000025667	adgrb2	19: 38766613 ~ 38872650 (-)
ENSDARG00000039385	dlg4b	23: 44307996 ~ 44332790 (+)
ENSDARG00000059177	tax1bp3	11: 6136220 ~ 6145158 (+)
ENSDARG00000073914	fam163ba	10: 10636237 ~ 10700769 (+)
ENSDARG00000058988	NA	10: 158590 ~ 159597 (+)
ENSDARG00000088842	NA	24: 13361846 ~ 13566015 (-)
ENSDARG00000063569	NA	--
ENSDARG00000077552	NA	--
ENSDARG00000088161	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

15 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.