CI01000059_04874700_04894979 (AKAP10)


Basic Information

Item Value
gene id CI01000059_04874700_04894979
gene name AKAP10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 4874700 ~ 4895199 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_04874700_04894979.mRNA
CTAAAGGAAAGGAACCTGAGAGACCAGCAGATGCCAAAGCCAGCAAAGCCCCAGTGTCGCCCCACTCCCCCTCCCTTAGTGGCCGTAATCATCATGCTATCCTGGAGGCGGCGGGACCCAGCCATGTGGCCATCAATGCTATCTCAGCCAACATGGACTCGTTTGCTCGTGGCCGCACTGCTATCCTCAAAAAACAGCCTAGCCACATGGAGGCAGTACACTTTGGAGACTTAGGTCGTTCCAGTATCAATTACCAGCTTCAAGAGACCCGCTCTCGGCTTTCTAAAACCGTAGACCAGATCCTGCGAGATAATGTGGCCATGCCCTACTTCATACAGTTTATGGAGACCCGCTCAGCTGATCACCTGGTCCGCTTCTGGCTTGAGGCTGAGAGCTTTCGGTCCACCAGCTGGTCGAGGGTCAGAGCACACAGCCTCAACTCAGTCAAACACAGCACCTTGGCTGAGCCCGCGGCTGCTCTGGGATCTCCCGACTCACCAGACTCCCCAACCGACCCCAGCAGGCCCTCAGCTCTGGGCGAGGGACATGAAGAGGACCCCTTCCCTTCCCGGACTTCCTCCAGACCTCAAACCCCCAGCCCTCAGGACACTAACTCTCATACCGGGGCTCTGATAGGCCACCGGAACTCTGTTAGCTCAGAGGGTGCGGCCCGACCTGGGACTCCCCACCTGGAGCCCACCCTAAGATCAGAAACGCCCACCAGACAGCCCTCCTCCAGGACAGGCACTCCAGTTAAAGGCCAGTCTGCTGGTGGCCTCCGTGAGCTCTCTGACAAACTCATGAAAAGTATAGAGAGGGATGCCGTTAACATTTTCACCAAGTACATATCTCCAGATGCTGCTAGGCCTATTCCCATCACCGAACAGATACGCAACGACATTGTGGCGAAAATCTGTGGTGAGGACGGACAGGTGGACCCAAACTGCTTTGTCATTGCACAATCTGTTGTGTTCTCCATCATTGATCAACAGCACTTTAGCGAGTTCTTGCGCAGCCATTATTTCTGTAAGTACCAGATCGAGGTGCTGACCAGCGGCTCGGTGTTCCTGGCGGACATCCTTTTCTGCGAGTCAGCCCTCTTCTACTTCTCTGAGTACATGGAGAAGGAGGATGCAATGAATGTGCTGCAGTTCTGGCTGGCTGCAGAAAACTTTCAAGATCAGTTGGCTGCCAAGAAAGGCCAGTATGACGGACAGGAAGCCCAGAATGATGCCATGATCCTCTATGACAAGTATTTTTCACTCCAAGCCACAAATCCATTGGGTTTTGGTGACTCTGTACGGATGGAGATCGAATCCAATATCTGTCGAGAAGGCGGACCTCTCCCAGACTGCTTCAACACTCCACTAAGACAGGCCTGGACCACCATGGAGAAGGTTTACATGCCAGGCTTTCTGTCAAGCAACCTTTACTACAAGTATTTGAGTGACCTTATTAACTCTGTACGGGTGGATGAGTTCATTGGAGGAAATGCCAACACTCCGAACCAGGGCTGGACCCCGGAAAGCGACCGCAACTCAAGCGTCACAGAAGGGTCACAAGCCCAGTTGCAGCAAGGTACTAAAAAAGCGGCAATCAAGATCCTGAAGAATTTCGATGAGGCGATAACAGTGGACATTGCCAGTCTGGACCCTGAGTCTCTCTACCAGAGACCATATGCTGGAAGAATGACCTTTGGAAAGGTGAATGAGCTGGGCCAGTTCATCAGAGAGGCCGAGCCAGAACCAGATGTGAAGAAGTCCAAGGGCACAAGAAGAGATGGCATGGAAGATTGCAAAGATGATCGTAAATGATGTCATGCAGCAGGGACACCATGGAAGCCCTGAAGTAAAGTCAACAAAAGTACATAATATTATTTTGAGGATAGCTGACCTAAAAATTAAAATTCTGTCATTTATTTACATGTTGTTCCAAACCCAGACTTACTTTCATCTGTGGAAAACAAAGGTGATTCCTAAGAATGTTTATGCTCCAGTGATAAACCAAATTATTATTATTTTTTTTTACCAAAAA

Function

symbol description
akap10 Predicted to enable protein kinase A binding activity. Acts upstream of or within erythrocyte development and lymphocyte differentiation. Predicted to be active in mitochondrion and plasma membrane. Orthologous to human AKAP10 (A-kinase anchoring protein 10).

GO:

id name namespace
GO:0008104 protein localization biological_process

KEGG:

id description
K16526 AKAP10; A-kinase anchor protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_04874700_04894979.mRNA True 2034 mRNA 0.50 12 4874700 4895199

Neighbor

gene id symbol gene type direction distance location
CI01000059_04856861_04864485 EHD2A coding upstream 9668 4856818 ~ 4865032 (+)
CI01000059_04824311_04826989 NA coding upstream 47657 4824311 ~ 4827043 (+)
CI01000059_04805360_04812055 RSPH4A coding upstream 62626 4805280 ~ 4812074 (+)
CI01000059_04804388_04804862 NA coding upstream 69687 4804388 ~ 4805013 (+)
CI01000059_04788367_04802962 SYMPK coding upstream 71738 4788367 ~ 4802962 (+)
CI01000059_04902321_04910027 NA coding downstream 6158 4901357 ~ 4910211 (+)
CI01000059_05058175_05064473 TMEM211 coding downstream 162226 5057425 ~ 5065052 (+)
CI01000059_05076930_05080987 NA coding downstream 181427 5076626 ~ 5080989 (+)
CI01000059_05091228_05097586 ZFPL1 coding downstream 195407 5090606 ~ 5098143 (+)
CI01000059_05143220_05166573 PAK1, PAK3 coding downstream 248021 5143220 ~ 5167441 (+)
G253523 NA non-coding upstream 6809 4865762 ~ 4867891 (+)
G253569 NA non-coding upstream 107011 4767335 ~ 4767689 (+)
G253568 NA non-coding upstream 110839 4763608 ~ 4763861 (+)
G253537 NA non-coding upstream 125143 4747333 ~ 4749557 (+)
G253564 NA non-coding upstream 145843 4728655 ~ 4728857 (+)
G253585 NA non-coding downstream 56499 4951698 ~ 4952570 (+)
G253539 NA non-coding downstream 60837 4956036 ~ 5007606 (+)
G253614 NA non-coding downstream 207692 5102891 ~ 5104208 (+)
G253615 NA non-coding downstream 211363 5106562 ~ 5106807 (+)
G253618 NA non-coding downstream 216160 5111359 ~ 5111727 (+)
G252732 NA other upstream 1671609 3202739 ~ 3203091 (+)
CI01000059_02133197_02134625 NA other upstream 2739522 2133003 ~ 2135347 (+)
CI01000059_02068570_02070710 NA other upstream 2802776 2068544 ~ 2071924 (+)
G251249 NA other upstream 3213310 1627766 ~ 1661390 (+)
G251017 NA other upstream 3807343 1056252 ~ 1067357 (+)
G253654 NA other downstream 342560 5237759 ~ 5238233 (+)
G254692 NA other downstream 1364844 6260043 ~ 6261633 (+)
G255434 NA other downstream 2549743 7444942 ~ 7450195 (+)
G256046 NA other downstream 3459020 8354219 ~ 8354873 (+)
CI01000059_08640558_08653639 NA other downstream 3736752 8640451 ~ 8654233 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030565 akap10 coding NC_007116.7 CM002889.2 62009765 ~ 62043299 (+)