XLOC_010247


Basic Information

Item Value
gene id XLOC_010247
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46796426 ~ 46797326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022035
tatgcttcatttactcaaatggattaagttcacagtactcattaggatcagtttttgaacttaaatggtttgttgctattggtttcctcaaacagtttgcgTTACCCTAATgtttttggttttacagtgtaataatgcTAATTTTTAGCATTTACTTTGTTGTAccttttaacattagttaatgcactcaCAAGGTCACAATCTAGAACTAACAACAagtaactttattttcatttaataccGATTTTAAAAAtcctgtaataaatgtattgttcattgtttgttcattttagtaaatacattaacattaatgaCCTTATTTAGGGACCCAAACCTCATCGAGTAACTTTCAATTATTTTCATAAATCACATATTCAGTTTCTACAACTCGGCCGTTCCTCTTGACCACACGCTGATATGTCTGAATGCCTTGCTCCACGTTCTCATGATATCGAGTCATTGTGCCATTTCCTGGCTGCCTCATCAGAGCATGGCTGTTGTTACTGTACGATGGAACCAGCTCATTGTTCATCTAGGAGAAAATATGTGGAATATGAGGAAATGCAAGAATCAGTTTCAGCTAGGTTGACTTGATAAGCACTGAAAAACTCTCAAGAAAATTTTTTCCTCTCAGTTCTCATTTAGACTTTTTATTGAAATTCTTACCGTAAGAGCTGGGAAGCCTGATTGCTCCGCCTGGTTACACTTACATTTATACGGTAATGGCCCATTGTAGTATTTCATCAAGCCGCATTTATCACAGGATTGTGATGCCTATAGTTTGGAACACACGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022035 True 795 lncRNA 0.36 2 46796426 46797326

Neighbor

gene id symbol gene type direction distance location
XLOC_010246 NA coding upstream 2254 46790677 ~ 46794172 (+)
XLOC_010245 rab11al coding upstream 54647 46725087 ~ 46741779 (+)
XLOC_010244 rab25b coding upstream 82374 46695777 ~ 46714052 (+)
XLOC_010243 lamtor2 coding upstream 105220 46684855 ~ 46691206 (+)
XLOC_010242 ubqln4 coding upstream 115256 46666074 ~ 46681170 (+)
XLOC_010248 CABZ01027551.1 coding downstream 9888 46807214 ~ 46808014 (+)
XLOC_010249 NA coding downstream 29262 46826588 ~ 46830237 (+)
XLOC_010250 thsd7ab coding downstream 71684 46869010 ~ 47178134 (+)
XLOC_010251 CR848802.1 coding downstream 215015 47012341 ~ 47012457 (+)
XLOC_010252 NXPH1 coding downstream 406096 47203422 ~ 47204301 (+)
XLOC_010241 NA non-coding upstream 226942 46556343 ~ 46569484 (+)
XLOC_010240 NA non-coding upstream 227274 46555394 ~ 46569152 (+)
XLOC_010233 NA non-coding upstream 514270 46276944 ~ 46282156 (+)
XLOC_010232 NA non-coding upstream 525538 46269724 ~ 46270888 (+)
XLOC_010255 NA non-coding downstream 586469 47383795 ~ 47389378 (+)
XLOC_010257 NA non-coding downstream 966899 47764225 ~ 47764819 (+)
XLOC_010258 NA non-coding downstream 1201506 47998832 ~ 47999411 (+)

Expression


Co-expression Network