XLOC_010252 (NXPH1)


Basic Information

Item Value
gene id XLOC_010252
gene name NXPH1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 47203422 ~ 47204301 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020266
TGAAACCCTTTTAAGTGTGAAAGGCTCTAATAGGTTAATTAATAGTTGGTGTATAAAACTGTCTTGTTGTGTTTGCCTCAGATAAGATATGCCACTGCAAACAGTCCAACATCCCTGAGGTCTCTACAGATGGACAGGTCAAAGACGACATCCAAGCATCCATGTTTTGACTCTGACCCTTCGCCCATATCAAACTCTGATGTCCCTGATGCCCTCCTGTCCAACAAAATCCAGCCGTGTCCTGATCAGGAGCTGTGGGATTGGGCCCCTAACCTGACGGAAATGCATCCATCTGCTCAACAAACGAGAAAACAAGACACCGTGAAAAGAGGAAAAGCTAAGAAGATGTTTGGCTGGGGAGATTTCCAGTGCAAAGTCAAATCCACAATCCTGAACCTGCTCATCACAGGGAAGATCGTGGATCACGGCAACGGGACGTTCAGTGTTTATTTCCGCTATAACACCACTGGAGGAGGAAACGTCTCTGTAGGGCTGGTTCCTCCTAGTAAAGCGGTGGAGTTTGACGCGAGTGCTCGACAAACTGTTCTGCACTCGGTGGAGTCGCGGATGTTTAACTGCAGGGTGGAACATGAGAGGGTGGAGAGAGGAACTAAAGCTGCCCGCTGCTGGTACGATTCGTCCCAGAGCTGCGATCAGGACCAGACTCACAGCCAGGTCTCTTGGCTGTGCTCAAAACCATTCAAAGTCATCTGCGTTTACATCTACTTCAACAGCCTGGACTACAAACTGGTGCAAAAAGTCTGTCCAGACTACAACTACCACAGTGAATCCCCGTATTTACCTTCTGgataatcatttattcatacactacctgacaaaagtcttgttgtcgattccagttataaaagcaataaataat

Function

symbol description
nxph1 Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Is expressed in brain and spinal cord. Orthologous to human NXPH1 (neurexophilin 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-231 Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Is expressed in brain and spinal cord. Orthologous to human NXPH1 (neurexophilin 1).

Ensembl:

ensembl_id ENSDARG00000098402

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020266 True 880 mRNA 0.47 1 47203422 47204301

Neighbor

gene id symbol gene type direction distance location
XLOC_010250 thsd7ab coding upstream 25288 46869010 ~ 47178134 (+)
XLOC_010251 CR848802.1 coding upstream 190965 47012341 ~ 47012457 (+)
XLOC_010249 NA coding upstream 373185 46826588 ~ 46830237 (+)
XLOC_010248 CABZ01027551.1 coding upstream 395408 46807214 ~ 46808014 (+)
XLOC_010247 NA coding upstream 406096 46796426 ~ 46797326 (+)
XLOC_010253 ica1 coding downstream 3390 47207691 ~ 47232146 (+)
XLOC_010254 col28a1b coding downstream 104555 47308856 ~ 47344147 (+)
XLOC_010255 NA coding downstream 179494 47383795 ~ 47389378 (+)
XLOC_010256 slc25a32b coding downstream 224420 47428721 ~ 47450004 (+)
XLOC_010257 NA coding downstream 559924 47764225 ~ 47764819 (+)
XLOC_010246 NA non-coding upstream 409250 46790677 ~ 46794172 (+)
XLOC_010241 NA non-coding upstream 633938 46556343 ~ 46569484 (+)
XLOC_010258 NA non-coding downstream 794531 47998832 ~ 47999411 (+)
XLOC_010259 CR388140.1 non-coding downstream 818992 48023293 ~ 48023408 (+)
XLOC_010260 CU929195.1 non-coding downstream 954008 48158309 ~ 48158423 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_00808322_00809068 NA coding CI01000027 null 808068 ~ 809068 (-)