CI01000063_01643090_01644021


Basic Information

Item Value
gene id CI01000063_01643090_01644021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1642653 ~ 1644437 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_01643090_01644021.mRNA
TTATAAAAGGACTAATCAGTGCGATTTGCAGAATCATCAAACATATGAAAACACCAACCAATGTAAATGTTACACATAAATGTGAATTAAATTTACTGTCATGCGCAGTAAGCTCACTTCGCCACCTCGAGATGTATTATGGGAAAGTTCCGTCAGCGGAAATAGATGTAAACATGTGATTGTCAACCGGAGCGCTTGGTGCAGTTATGTTTGTGTTATACCGCTGTGAAAACCAATATGCTTGTTTCAAATAAATGTGCTTGAAAAATATTTAAAGAATCTGTTGATAATCTTGAAGTATTGAATCGGGCTGTTGTGTTTTTCGAAACCCGTTCAGTTTAGCTAACATTTAGCATTTGCGTTCATAGGAATGTATGTGTTTATTTCACGCAGTGTTTAGCAATAATTCTTACGTTGCTTCAAATCTGTAAGTGTTCATGGCATCCAAACAGCCATTTACATATTCTGACACTGCTGACGAAGCGGTCAGAGCAACTTGCGACGATGCATCGATATGCAAAAGGTTTGCTACCAGTAAAGGTTACTGGACTGACCTCTACGCCCAGTATTTTGTGAGGCAAATAGGTGAACGTAAAGCACCTGAGATCAACAGAGGCTATTATGGTCGTGTCAAAGGGGTGAATCTCCTTCTTGATGCTTTTCTCGAGAAGACACAATGTGACTGCCAGGATGAAAACATTATGCCGAAAAAGTTCTTTGAAGTTGACTTCCCAACGATTGTTGCCAGAAAAATACACCACATCAAGTAAGGTGTTATTACTTTTGAAATATTATTATTGCTGTTATTTTTCAATAATTTACGTTTTGACATTAACATGAATGATTTTGTATGCTTAGCATGTTGTTTTAGTCATATTCCTGTAGAGGGAGACAGTGTCTTAAATGAGTAGTTTAGGAGCCCTCTGTCTAGCAATGTCCACCCTCCAAAGCAATGGTTGGTTTGTATATCTGTCATCTTTTGTGTATTAAATTTATCGGTCCTTTTGTGCTCTTTATCATTTTAAAGTATCCCACCTGAATTAATACTGTTCAATACCTGTTATGCATATGAATTATACTTGTGTGGAGGATGTTTTGTCATGGGTGATTAGATATGGGTGATTAGTATGAAAGTTTTTTCCTACCAAAATTAAAATGAAATATCAAATGCTCAAATTATCAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_01643090_01644021.mRNA True 1186 mRNA 0.36 4 1642653 1644437

Neighbor

gene id symbol gene type direction distance location
CI01000063_01563309_01595922 GRID2IP, GRID2IPB coding upstream 46731 1563309 ~ 1595922 (+)
CI01000063_01544850_01548093 MLST8, MLST8.L coding upstream 94319 1544786 ~ 1548334 (+)
CI01000063_01537233_01540577 NA coding upstream 102019 1537233 ~ 1540634 (+)
CI01000063_01533946_01534527 MSRB1B coding upstream 107682 1533853 ~ 1535375 (+)
CI01000063_01531962_01532897 NEURL2 coding upstream 109644 1531293 ~ 1533009 (+)
CI01000063_01658882_01660951 AQP8A.1 coding downstream 14445 1658882 ~ 1661142 (+)
CI01000063_01662111_01665744 AQP8A.2, AQP8, AQP8A.1 coding downstream 17674 1662111 ~ 1665744 (+)
CI01000063_01672649_01673337 HBBE2 coding downstream 28137 1672574 ~ 1673385 (+)
CI01000063_01675750_01678399 HBBE3 coding downstream 31064 1675501 ~ 1678458 (+)
CI01000063_01692878_01697954 NA coding downstream 47957 1692394 ~ 1698078 (+)
G262266 NA non-coding upstream 133025 1509279 ~ 1509628 (+)
G262211 NA non-coding upstream 443816 1196368 ~ 1198837 (+)
G262194 NA non-coding upstream 497646 1139352 ~ 1145007 (+)
G262191 NA non-coding upstream 507135 1132990 ~ 1135518 (+)
G262101 NA non-coding downstream 10765 1655202 ~ 1656049 (+)
G262104 NA non-coding downstream 37782 1682219 ~ 1686364 (+)
G262314 NA non-coding downstream 93361 1737798 ~ 1738321 (+)
G262333 NA non-coding downstream 161527 1805964 ~ 1806185 (+)
G262122 NA non-coding downstream 167071 1811508 ~ 1813486 (+)
G262060 NA other upstream 932099 710110 ~ 710554 (+)
G261984 NA other upstream 975271 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1084319 533801 ~ 558334 (+)
G261700 NA other upstream 1368203 252412 ~ 274450 (+)
G262423 NA other downstream 596971 2241408 ~ 2242965 (+)
G262436 NA other downstream 1069178 2713615 ~ 2714517 (+)
G265391 NA other downstream 4269346 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 4690841 6335618 ~ 6338283 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location