CI01000063_00533801_00557577 (MPP3B)


Basic Information

Item Value
gene id CI01000063_00533801_00557577
gene name MPP3B
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 533801 ~ 558334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_00533801_00557577.mRNA
GTTTACATGAGATGCTAGCTCTCCTCACCTCCCAGCTGCATCCAGAAGCTAATCATAAGGAGGATCTGGTCTTCCTCAGAGAGGTCTTCAGTGAGAGGAGCCTCAGCTATCTTATGAAAATCCATGAGCGATTGAGGCAGTTCCAGCTCCAGTGTCCGACCCCAGTGTTCCATAGCGCATCCTGCCTGGCCGAAGACGTCGCAGAGGAGCTACAGAACGGACCACTGGAAGACGATGAGAGAGAGCTATTAACACTTCTTACCGCTCCACATGTGAAGGCAGTATTAACAGTACATGACACAGTGGCACAGAAGAACTTTGAGCCTGTGCTCCCCCCTCTACCAGATGATCTAGACGATGAACTGGAGGAGGAATCAGTGAAGATCGTGCGTTTGGTGAAGAACAAGGAGCCTCTTGGTGCGACCATCCGCAGGGACGAGGTAACTGGAGCGGTGGTGGTTGCTAGGATCATGAGGGGCGGGGCTGCAGACCGCAGTGGTCTGGTGCATGTTGGAGATGAGTTGAGGGAAGTCAATGGAAATCTCATTATACACAAACGTCCTGAGGAGATCAGCCAGATTCTGTCTCAGTCTCAGGGCTCGATCACTCTGAAGATTATCCCTGCCATTAAGGAGGAGGACAGATTCAAGGAGAGTAAGGTCTATTTAAGAGCCCTGTTTGATTACACACCATATGAGGACAAGGCCACACCCTGCCAGGAGGCAGGACTGCCTTTCACACGTGGGGACATCCTGCAGGTGGTGAGCCAGGACGACCCAACGTGGTGGCAGGCCAAAAGAGTGGGAGACAGCAACCTGCGTGCCGGCCTTGTTCCTTCAAGACAGTTCCAGGAGAGACGACTGTTGTATAGGATGAAAATGGGAACACACCAGAGCCCTAAATCACCCAGAGCAACACCATCAATTGTGTTTGTTTCCTCATTCTGCTTACCCAAGGTGACCAATCTTGTGAAAAAGATGGTCTTTTCCTTTGTTGATATATTGAAAAATCTCTTTGCTCTCACAGCTGGTCTAAGAAGAAGCTTCAGGCTGAGCCGCAAGGATCATCAGGGTTCAACCAAAGAGTCTCACCCAGCGGAGTCCACAGAGAATGAGTTCCTCATATATGAAGAGGTGACCCTACATCAGATGAGACTTCAAGATAAACCAAGACTTGTGGTTCTGATAGGATCTCTTGGTGCTCGGATCAATGAGCTGAAGCAGAAGGTGATTGCTGAGAATCCTCATCGGTATGGTGTTGCTGTGCCACACACAACAAGACCCAGGAAGAGCCATGAGAAGGAGGGTGTAGAATACCACTTCATCTCCAAGCAGGCTTTTGAGGCTGACATACAATCTAATAAGTTTATTGAATATGGTGAATATAAGAATAACCAATATGGGACGAGTCTGGAGTCAATCCGGAGTGTCCTGGCGAGAAGTAAAGTGTGTCTGGTAGATGTTCAACCTGAGGCTCTGAAAATCCTCCGTACGGCAGAGTTTAAGCCCTATGTGATCTTTGTAAAGCCACGCATCCCTGAGATTCGTCGGCAACGTAGCTCTCCCACATCACCAGGAAGGGGTGACAATGGACACATCACGGATGAAGACCTGCAGGACATGAGGCAGTCAGCCGAGCAGATGGACCAGCAATATGGCCATCTAGTGGACAGGGTCTTGGTAAAGGAGGACTCTGCCAGTGCCTGTGCAGAGCTGAGGAACATTCTGGAACGACTCGAGAGGGAGCCGCAGTGGGTGCCTGTCAGCTGGGTCCGAACTTGATCTTCAATACTTCCTTAAATTCTTACACGCATATGGTGTATTGACAACATAGACCTCTCTGCCTCTTTCTGAGTCTGCTGTCTGCCAGTTTCTGTTTCATTCTGTTTGACTTAAGTAATACAAAGCAAA

Function

symbol description
mpp3b Orthologous to human MPP3 (membrane palmitoylated protein 3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_00533801_00557577.mRNA False 1910 mRNA 0.49 16 533801 557706

Neighbor

gene id symbol gene type direction distance location
CI01000063_00478894_00523263 NA coding upstream 10440 478894 ~ 523361 (+)
CI01000063_00473977_00476385 NA coding upstream 56863 473977 ~ 476938 (+)
CI01000063_00452557_00462052 ZNF281B coding upstream 71651 452557 ~ 462150 (+)
CI01000063_00299119_00371545 NA coding upstream 162054 298970 ~ 371747 (+)
CI01000063_00077035_00147667 PLCD3B coding upstream 386134 77035 ~ 147667 (+)
CI01000063_00562850_00563761 PPP1R3CB coding downstream 5044 562750 ~ 563922 (+)
CI01000063_00659693_00662317 NA coding downstream 101924 659630 ~ 662425 (+)
CI01000063_00669808_00687564 NA coding downstream 112102 669808 ~ 687816 (+)
CI01000063_00737387_00744421 PANK1, PANK1B coding downstream 179378 737084 ~ 745002 (+)
CI01000063_00768000_00776500 SLC16A12B coding downstream 209177 766883 ~ 777761 (+)
G261996 NA non-coding upstream 102131 431264 ~ 431670 (+)
G261995 NA non-coding upstream 105465 428031 ~ 428336 (+)
G261962 NA non-coding upstream 131981 401465 ~ 401820 (+)
G261960 NA non-coding upstream 139077 394128 ~ 394724 (+)
G261704 NA non-coding upstream 149752 383601 ~ 384049 (+)
G262010 NA non-coding downstream 15907 573613 ~ 573817 (+)
G262011 NA non-coding downstream 16193 573899 ~ 574441 (+)
G262017 NA non-coding downstream 39833 597539 ~ 597914 (+)
G262026 NA non-coding downstream 55757 613463 ~ 613695 (+)
G262034 NA non-coding downstream 63411 621117 ~ 621432 (+)
G261700 NA other upstream 259351 252412 ~ 274450 (+)
G261984 NA other downstream 108094 665800 ~ 667382 (+)
G262060 NA other downstream 152467 710110 ~ 710554 (+)
G262194 NA other downstream 586165 1139352 ~ 1145007 (+)
G262423 NA other downstream 1683702 2241408 ~ 2242965 (+)
G262436 NA other downstream 2155909 2713615 ~ 2714517 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004607 mpp3b coding NC_007123.7 CM002896.2 16233077 ~ 16276276 (+)
bowfin (Amia calva) AMCG00016842 mpp3,LOC100693772 coding CM030122.1 CM030122.1 32171872 ~ 32196229 (+)