CI01000063_06276811_06289690 (FBRS)


Basic Information

Item Value
gene id CI01000063_06276811_06289690
gene name FBRS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 6276052 ~ 6289732 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_06276811_06289690.mRNA
GTTTAAAAGCGAGTGTGTTTAATTCGCGATCATAACCAGGTTAGCTAACTAGCAAGCTAACATCGAGCGATGTAACTCGTCGCTTCATTACGCGATTTATCTGCTTTAGATTCAGGAAAAAAAAGACTTTGACTAATATTTTAATCTAAAAGGATTCATTTTGCTCCACGGTTGGGCTTTGTTTGTATTCATCTACCTTTTAATAAAGTTCACTAACGAAAACTCAGCCCTAACTTATAAGGTAGCACATTTTTCTCTTTTATGTTATTAGCATATCATAGTTATACTTTAAAAGACTATAAAACATATGTCAGTGTATATTCTATAAGAAGAAAACCAGCTGTTTCCAACATAACCAATGCACATTTCCTTAGTTAAACAGCCATATTGAATCTTTAAATGCCTGACTGCGCCACTCATGGGTAGTTTCTCCTTTTTTCCTTCCCCAGATGAAAGTGACAATGTCTTGACAGAAAGACCGTAAGTGGAATATCTAGAAGCTTTCATAATCGCTGTGTTATTGGATAAAACAGGCCCGTTGATGCCCAGACATGACTGAACTCAGACTGCAGTGTGCTCGCACCATACAGCTTCCACTGGACTCTATTAAATTATAAGACAGAAACCTTAAACCACATTTTCATCTGAGATCCACAGCTCTGGTCCTGGAGGCGTTGGTTTTTATTCAGTAACAGTTGTAAAGACTCCCAGGCCGGACCAGGGTGTGTTTTTAATAAGTGCCTTTGTACGAACATTGACATGGACGGTCCCAGTCGAAGCGGAGGCTTCAGGCAGAGCCGTCGCTCCCGCTCGCAGCGTGACCGAGAGCGGCGGCGGAGGAGAGCGGATCTCGAAGAGCCCAGGGCCTCGTCGCCATCCTCGGCCTCGGACCAAGAACTCTGTAGAGGAGACTCTCTGCTCCGTGCCAGCGGAGGAGAATGCAGACCCGGCTTCCCCGGGGCCAGACACCGGCCTCCGCGTCGGAGGAAGCGAGAGTCGGTGTCTTGCGAGGAGGATATCATTGATGGATTCGCCATAGCCAGCTTCATAAGCCTGGAGGCCTTGGAGATGGACTGTTCCCTAAAGCCTCCAGAACGATCTGGCTTGTTAATAAGTAGAGGAAGCAAAAGGAAGAGAGGTCTAGATGAAAACGGAGGGCCTCTGTCAGAGCCGGAAGAAGGACCTCCTGCTACGTACACCAACAGTTGGGAGCAGCGCAGGAAGATCAAATCAAAACTGAAGAGAAATAGAGATGCTAAGTTATCTGGAAATCACATGGAGACAGGATACATTTGCGATACAGAGAGTGAATCGGGAGATAAGCAGTTAACTCCAACTCTGCAAGCGCTGCTGTGGGCAACGGTTGCCCTCTCTTGCCCTCGAATAGCTCACTATCCCTTCTGTCAGTCACACCCCGGGTCTCTGGCCTGGAGAGGAGTCAGGAGAGGAGTATGGAGCAGCCTTACCCTGAGCCCATCTCTACCTCATCCTCTCTGCCTAGCCTTGCAGCCCATTCCACTGCTTCTGTCTCCAACTCACTTCCTGAGCAGCGTAATGGAAATGGTGGTCCTCATCACCGCCATAATCCTAGCCCACAGCACAAACACAAGCCTTTCCTCCCTTTCCCTGGAAAGTCACAATCGATCTACTCAATGGCCAGCAACAACAGTTCGAGGCCCAGGGGGTGTGGGGACAGTAAGACCCTCCTCTCGACCAAGTCCTGGTGCTGTCTTCACACCGTCCCCCAGCCTTCCCCCACCTCCTCCTCTAATGCAGGTGTCACCCCACCCTTCAACAGATCAGGATCCGACACAATCAAATGCCTCTGCATCTGGAGGACCGTCTGTGTCAAGTTCAAGCTCTGGGACATCTAGCAGATCCTCCCAGGCCCAGACGTCTATCCCTACAATGGCCTACCAGTTCCATCAGCACAATCACCAGCACCAGCACACTCATACTCACCAACACTTCCTACATCCCACAGCTGCACCACAACCATTGTTCGAGAAGTATCCAGGCAAAATAGACAGTCTCTTTCGACACCCATTTTTTCCTCAGTACCCACCATCTGTGCCTGGAATACAGCCTGTTCTTCCGCCCACAGGACCTTTCAGTTCATTGCATGGAGCTTTTCAGCCTAAGGGAGCTGCTCCAGAGATGACTTCTGGTTTAGGAGTTGTACCGCCTCATCTGCAGCCTAAAGCTACTAGGCTAACAGACCCATTTGCACCACCACCAAAAGTCAGTAATCTTATGCATGCTGATCCACAAAAGCTCGACTTCCGTAATGACCCATTGCCTCGACTCACTGGCCCTGGTATTGGTGGACTAGGAGGTCTAGGACCACTTGGTGGTTCCCTTACCCCAACTCATGATCTTACAAGACCAGGAAGCCTGTTTGCAGCCGCTGGTGGAGTCAATCCGTCCTCCACACCATTCATGCCTCCATCAACGCCCCACTCTTTCCTCAGCCCAGCAGCACATCTGGAACCATATGTTCGTTCACCACCGTTCTCTTTGGGAGCCCTGGGTTCTAGTGCCTTTGGAGGCCTAGGCAGCCCCACGATAGCGGCCAGTGTTTTTGGACATAAGACCGAACCCTCTGCAAGTGCGGTTGGAGGACTAGGTAATCCCCATGATCCATGGAATCGTCTGCATGTTGCTCCTGCCTCTTTCCCCTCTGGATCGTCTTGGGCCAAGGGACCGGAGAAAAAAGATGATCGAGGAAAGGAAGTGGAGAGAAGAGAACTGACTCATATAAAAGATGAAAAGGACAGAGACAGTTTCATGTATGGACGCCCACCAGTGCGAATGTCACCTGGTGTCCCATCCATCAGGCACCGCAGCAACACCCCCAGTTCACATACGAATGGCTTGGGTGCACTGAGCGTAGGTGGGGTCCCTTCAGATGGCCAAAGCAGAGAGCGTGAACGAGAAAGAGAGTCAGACAAGAGACAACATTCTGCATCAAGGGGACCAGGGTCATCTTCCTCTGTAGCACCGGACAGACCTCGATCCTCAACATCTTCTATTCTCACAACCTCTCCTTCTAATGTCCCCTTAGCCCCTTCTCCCCTGGATCTGTTTCACCGACAGCCACCACACACTCTCAGCACAGAATCCAGTCACTCTTCGCAAAGAGAGAATAACGGTCCAGCCTCTTCTTCCTCTTCTAGTTCGCTTCCAGTAAAGAAACCTGATCGGACCACAACTCCAGTATCCAAACCTGTAATTGGTCTACCAACTGGGCTGCTCCTCCCCCAAGTCAAGGTCAAAGAAGAGCGTAAGGAGGAGCCTGAGCCAGTGCCCATCTCCATACCGCATTCTGCCGTAACTTCACACAACTTTGAACGGCCCAGTAGTCGACACACACACCATCCATCCACCCCTTCCTCAACCCTCTCATTGACGCCTACACCTGGCATTCCTCTTCCTCCTCCAACTCCGCACCCTCCCCACCATCCTCTGTCCCTTTTAGATCGTACACGGGCTATTGATGCCTATCTAGGTGGTGCTGGAGGCTCAGCCGGACTGGTATTAGGTGCTGCAGCTGACCGTTTCCCACCACATCCACATGGTCCTCCGCAAGGTCATTCCCAAGCCACTCACAGCTTTCCTTGGGACCCTTGGAGGGATCTGGCCGCCCAACAACAACAGCAGCAGCAGCGCAGGGAAATATTGACTCTGAGGTCAGCAGATCACCTTGCACTTCGCTCTGATCAACACTTGTCAAGACTTCTCCAGCATCAGCAGGTACAGCGACTCTTGGAGGCTGAGAGAGCCGCAGTAGCGGCAGCTGTGGCGTCCAGCCCGCACCATCCACCAGTACCTACCTCTACGTCCTCTGCTTCAGCTTCAGCAGGCAGGCCAGAGTTCGGTTTGATGTCCCACCCATTTGATGAGGAACAACGTGCTCAGATAATGCGGGAAGACTTTGAGCGAGCACGGTACTTTGGGATGCATCCACATCCTCACCTGTCTGCACCTCACCTTCCTAGCCCGTCTCATGCTGCCCACCTAGAACAGCTTCACGCAGGGCTACTGTCTCACTCTCATCTCCATCCAGCTGGAGCCTCCGCACAAGCATCACATCACCCTGGCCTCTACTCTAGACTTGGACCCCTGCATTCACACTCTCATGTGCCTAATGGCATTCTAACGAAGACCCCAGGTCTAGTTGGGGCATTGTCAGTTGGGGCTCCACCACCTCTCATTCCTTCTGTTAACAGATCTTCTACTCCACCCCGCGGCTCCAGACTTGGTGGGGCAGGAGACTTGGCCCTTTTTACCACACATAAAGACGGCGAGTCAAGATAGTACTAGGTAAAGTTTGGGGAGCTTCCAGAACTACTTTGCTGA

Function

symbol description
fbrs Is expressed in Kupffer's vesicle; immature eye; nervous system; and somite. Orthologous to human FBRS (fibrosin).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_06276811_06289690.mRNA True 4359 mRNA 0.51 16 6276052 6289732

Neighbor

gene id symbol gene type direction distance location
CI01000063_06264735_06268961 MSL1B, MSL1 coding upstream 7002 6264500 ~ 6269050 (+)
CI01000063_06222033_06227075 ZNF438 coding upstream 48387 6222033 ~ 6227665 (+)
CI01000063_06157144_06165234 NA coding upstream 110724 6154985 ~ 6165328 (+)
CI01000063_06035175_06080992 ARHGAP12, ARHGAP12B coding upstream 195060 6035175 ~ 6080992 (+)
CI01000063_05973598_05981144 NA coding upstream 294908 5973598 ~ 5981144 (+)
CI01000063_06293923_06317422 SRCAP coding downstream 4191 6293923 ~ 6319073 (+)
CI01000063_06320398_06332096 TTLL6 coding downstream 30666 6320398 ~ 6332132 (+)
CI01000063_06335618_06338138 HOXB8B coding downstream 45886 6335618 ~ 6338283 (+)
CI01000063_06344484_06345613 HOXB6B coding downstream 54702 6344434 ~ 6346126 (+)
CI01000063_06347057_06348343 HOXB5B coding downstream 56905 6346637 ~ 6349040 (+)
G265334 NA non-coding upstream 2169 6270464 ~ 6273883 (+)
G265457 NA non-coding upstream 16785 6259057 ~ 6259267 (+)
G265456 NA non-coding upstream 17194 6258570 ~ 6258858 (+)
G265345 NA non-coding upstream 87383 6164331 ~ 6188669 (+)
G265425 NA non-coding upstream 140680 6134041 ~ 6135372 (+)
G265460 NA non-coding downstream 33545 6323277 ~ 6323624 (+)
G265463 NA non-coding downstream 48920 6338652 ~ 6338867 (+)
CI01000063_06408168_06418415 NBR1 non-coding downstream 128468 6407762 ~ 6419326 (+)
G266176 NA non-coding downstream 362085 6651817 ~ 6653969 (+)
G266294 NA non-coding downstream 731573 7021305 ~ 7021509 (+)
G265391 NA other upstream 357023 5913783 ~ 5919029 (+)
G262436 NA other upstream 3561535 2713615 ~ 2714517 (+)
G262423 NA other upstream 4033087 2241408 ~ 2242965 (+)
G262194 NA other upstream 5131045 1139352 ~ 1145007 (+)
G262060 NA other upstream 5565498 710110 ~ 710554 (+)

Expression


Co-expression Network