G262101


Basic Information

Item Value
gene id G262101
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 1655202 ~ 1656049 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU297508
GAACCATTGAAATTTCAAAATGTTTCGAAACACTTATGACATAACAAAGCCTCGTTTACTGAAATCACGTGACTTTGGCAGTTTGATACACGCTCCAAACCACTGATTCAAAACAAAAGATTTGTAAAGCTTCGAAGCTTTATGAAGCAGTGTTTTACAAATTGCCCATCACTAGAAATTGTTGAATAAAGTCGTTATTTTGTTTTTTTGGTGCACAAAAAGTATTCTCGTCGCTTTATATCATTAAGGTTGAACCACTGTAGTCGCATGAACTGTTTTAAATACGTCTTAGTATCTTTCTGGGCACTGAAAGTGTAAATTAACTTGCTGTCAATGGAGGCCTCAGTGAGCCATCGAATTTTATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAAGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAGTTCTAAGGTGGCACCAGCTCCTGATTTGGCTGCGCTGTGAGGACTGACAGAAAAGCACTGAGCTTGAGTTTAGATGCAGATAATATTAACTTTTTATTATTAATAAATATTAAAAACATATACTAGGGTGTGGAAATGGCTTATAAGCCAATAAGTGCGCCTCTTCAGCATCTACTACAGTGGTAGTTTATTGTCTTTTTTATTTCTAAATAAGTGTTTGCTTTCCTACATTGTGAAACTTTTAGTTTTACAAATGGGGACAAACTATGAAGGATGAATACATGCCAAATGAATACAGGACAAATAATGTTTTGGACATCACATTAAAAATAACATTTAAATTGGGCAATATTTAAAGCTTTGAAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297508 True 848 lncRNA 0.35 1 1655202 1656049

Neighbor

gene id symbol gene type direction distance location
CI01000063_01643090_01644021 NA coding upstream 10765 1642653 ~ 1644437 (+)
CI01000063_01563309_01595922 GRID2IP, GRID2IPB coding upstream 59280 1563309 ~ 1595922 (+)
CI01000063_01544850_01548093 MLST8, MLST8.L coding upstream 106868 1544786 ~ 1548334 (+)
CI01000063_01537233_01540577 NA coding upstream 114568 1537233 ~ 1540634 (+)
CI01000063_01533946_01534527 MSRB1B coding upstream 120231 1533853 ~ 1535375 (+)
CI01000063_01658882_01660951 AQP8A.1 coding downstream 2833 1658882 ~ 1661142 (+)
CI01000063_01662111_01665744 AQP8A.2, AQP8, AQP8A.1 coding downstream 6062 1662111 ~ 1665744 (+)
CI01000063_01672649_01673337 HBBE2 coding downstream 16525 1672574 ~ 1673385 (+)
CI01000063_01675750_01678399 HBBE3 coding downstream 19452 1675501 ~ 1678458 (+)
CI01000063_01692878_01697954 NA coding downstream 36345 1692394 ~ 1698078 (+)
G262266 NA non-coding upstream 145574 1509279 ~ 1509628 (+)
G262211 NA non-coding upstream 456365 1196368 ~ 1198837 (+)
G262194 NA non-coding upstream 510195 1139352 ~ 1145007 (+)
G262191 NA non-coding upstream 519684 1132990 ~ 1135518 (+)
G262104 NA non-coding downstream 26170 1682219 ~ 1686364 (+)
G262314 NA non-coding downstream 81749 1737798 ~ 1738321 (+)
G262333 NA non-coding downstream 149915 1805964 ~ 1806185 (+)
G262122 NA non-coding downstream 155459 1811508 ~ 1813486 (+)
G262098 NA non-coding downstream 194307 1850356 ~ 1854092 (+)
G262060 NA other upstream 944648 710110 ~ 710554 (+)
G261984 NA other upstream 987820 665800 ~ 667382 (+)
CI01000063_00533801_00557577 MPP3B other upstream 1096868 533801 ~ 558334 (+)
G261700 NA other upstream 1380752 252412 ~ 274450 (+)
G262423 NA other downstream 585359 2241408 ~ 2242965 (+)
G262436 NA other downstream 1057566 2713615 ~ 2714517 (+)
G265391 NA other downstream 4257734 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 4679229 6335618 ~ 6338283 (+)

Expression


Co-expression Network