CI01000070_02716808_02718052 (SLC35G2, SLC35G2A, SLC35G2B)


Basic Information

Item Value
gene id CI01000070_02716808_02718052
gene name SLC35G2, SLC35G2A, SLC35G2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000070
NCBI id null
chromosome length 4890654
location 2716808 ~ 2718247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000070_02716808_02718052.mRNA
ATGGATCCGTCCCCGACAAGGCAGCAGTACGGCTCCAAAAAGAGGGTTAAAATTCACCCTAACACTGTCACGGTAAAATATGCCACGCATTTCCCCCAGCCGGGCGACGAGGGATACGACGACGCTCCGTCCTTTGAGGACTTCGGCTCGTTCTTGGACAACAACCCGAGCAAGAGACTGGTGTCAGAAAGCGGTCAAGGCAGGACTTTATTCGGCACTATGGATTCTCGTCCCAAGGCCGATCAGAGGGAAAAAGGGGTTGGCGGGCAGCTGGCGAGCTTCGGCGAGGCCTCGGTCCTGGCCTCGCGCGTCACCTGGGGTGCCCTTTTCGGGGCGGCCATCGCGCACGGCTGCGTGGCCCTCATTACACGCCTGGCGGCTGACCGCTCCAAAGTGCCATCATTAGAGCTCATCTTCATCCGCTCGGTGATCCAAGTGTTGTCCATACTTGTGGTCCTCTACTACAAAGAGGCTCCCTTTGGGCCGAAGGGCTATCGGCTGCGTTTGTTCTTCTACGGGGTTTGCAACGTCATCTCCATCACGTGCGCGTACACATCCTTCGCCATCGTCCCACCCAGCAATGGCACCATCATGTGGCGGGCGACCACCACGGTCTTCAGCGCCATTCTTGCCTTCTTGCTCTTAGACGAACGCCTCGGTTACACTGACGTAGTGACGGTCGTAGGTAGTCTCTTTGGACTGTGTCTCGTGATGATCCCCAACATCGCCGACGAGGAAAAGTCCCCTCTGGGATTCTGGAAAGAAGCGTTTGGCTACACCATGACTGTAATGGCAGGTCTGACTGCTGCCCTGTCCATGATCGTGTACAGGGCCATCAAAGAGCGCGTCAGCATGTGGGCTGCGCTCTTCACGTTCGGCTGGACGGGAACCGTGTGGGGGGCGTCCACTATGTTCATCATGCAAGAACCCATCATTCCATTGGATACCGAGACGTGGGGCTACCTTATAGGAATCTGCATTTGCTCCACCGTGGCGTTTCTGGGAGTCTACTACGCCCTCAACAAGTTCCACCCAGCTCTGGTCAGCACCGTACAGCATCTGGAGATCGTAGTGGCCATGTTTCTTCAGCTTATCGTGTTGAGAATGATCCCATCCGTGTACGACGTCTTCGGAGCGCTGGTTATCATGGTCAGCGTGTTCGTCCTCACGGGGCTCAAGCTTTACAGGGTGGGCCGTGCCATCCGACAAGATTACCAGGAGATTCTGGACTCGCCGATCAAATGAGAGCGTCGAAGCGTGTGTACTTGAACGCATGAGGGGGCATGTTTATGTGCGTGTGTGTGTGTGCAGTGTTTCCCAGCCCCCTTCTCTTACAAATGTGCAATCACTGAATGTCTGGATCTTCGGCATTTATTTCGAATCGTGTCGTTGGAAGAGTGCCATTGGTGTAATGTCTTTGCTAACTGTTGATGTGTGAAA

Function

symbol description
slc35g2b Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in cranial ganglion; diencephalon; telencephalon; and trigeminal placode. Orthologous to several human genes including SLC35G2 (solute carrier family 35 member G2).
slc35g2a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC35G2 (solute carrier family 35 member G2).
slc35g2 Located in Golgi apparatus and plasma membrane.

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000070_02716808_02718052.mRNA True 1440 mRNA 0.55 1 2716808 2718247

Neighbor

gene id symbol gene type direction distance location
CI01000070_02659015_02664679 IDI1 coding upstream 51743 2658854 ~ 2665065 (+)
CI01000070_02533154_02606265 ADARB2 coding upstream 110543 2533154 ~ 2606265 (+)
CI01000070_01896260_01899561 NA coding upstream 817197 1896260 ~ 1899611 (+)
CI01000070_01822353_01824092 FZD8A, FZD8, FZD8.S, FZD8.L coding upstream 892209 1822220 ~ 1824599 (+)
CI01000070_01585549_01586715 NA coding upstream 1130083 1583657 ~ 1586725 (+)
CI01000070_02729755_02730338 NA coding downstream 11432 2725525 ~ 2735288 (+)
CI01000070_02756122_02778377 NCK1B, NCK1 coding downstream 37727 2755974 ~ 2778877 (+)
CI01000070_02820042_02841010 SUGCT coding downstream 101795 2820042 ~ 2841085 (+)
CI01000070_02893948_02896977 SUGCT coding downstream 175701 2893948 ~ 2896977 (+)
CI01000070_02982638_02987818 NA coding downstream 263390 2981637 ~ 2988464 (+)
G278166 NA non-coding upstream 92064 2623545 ~ 2624744 (+)
G277913 NA non-coding upstream 344345 2333212 ~ 2372463 (+)
G277872 NA non-coding upstream 456827 2259736 ~ 2259981 (+)
G277871 NA non-coding upstream 459856 2256628 ~ 2256952 (+)
G277868 NA non-coding upstream 465177 2251400 ~ 2251631 (+)
G278276 NA non-coding downstream 291431 3009678 ~ 3010211 (+)
G278298 NA non-coding downstream 313450 3031697 ~ 3031904 (+)
G278309 NA non-coding downstream 371782 3090029 ~ 3090233 (+)
G278311 NA non-coding downstream 382816 3101063 ~ 3101375 (+)
G276782 NA other upstream 1306670 1407794 ~ 1410138 (+)
G276678 NA other upstream 1590355 1126004 ~ 1126453 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023241 slc35g2b coding NC_007135.7 CM002908.2 3413854 ~ 3419998 (-)
bowfin (Amia calva) AMCG00009063 slc35g2,slc35g2b,LOC108263162,LOC107588046,LOC107687509,LOC103026733 coding CM030126.1 CM030126.1 23960599 ~ 23961852 (-)