G276540


Basic Information

Item Value
gene id G276540
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000070
NCBI id null
chromosome length 4890654
location 754792 ~ 815810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU313683
TTACGAATACAAGACTGAAAACTACTGAAAACAAAGAAGAATTGGAAAATGAGCAGTTGTACCTTTACTCCTGCAGTGTTTCCAGACTTGATGATGACGGTAGTCTCTGGTGCACGACTCAGCAGAGCAACTACAGACTGACGGATTTTGGCCACTTCATGCACATAAAATGTTATTGGGTGAAACACCCGGTGGGCAAAGATTGTGAAGACAACGACTGCATGAGGACCACCAGCTATTTCATCAATATCATTGCCGATATAATGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU313683 True 269 lncRNA 0.43 2 754792 815810

Neighbor

gene id symbol gene type direction distance location
CI01000070_00621764_00643105 PCOLCE2B, PCOLCE2 coding upstream 111357 621764 ~ 643435 (+)
CI01000070_00585685_00592670 ACBD5, ACBD5A coding upstream 161792 585634 ~ 593000 (+)
CI01000070_00532416_00535448 NA coding upstream 218844 532372 ~ 535948 (+)
CI01000070_00523938_00524339 NA coding upstream 229895 523590 ~ 524897 (+)
CI01000070_00192746_00193415 NA coding upstream 561324 191884 ~ 193468 (+)
CI01000070_00857832_00889186 C3ORF58, CSGR08H3ORF58, C20H3ORF58, CLG9H3ORF58, CLG20H3ORF58, C8H3ORF58, DIA1A, DIA1B, C10H3ORF58, CUNH3ORF58, C3H3ORF58, CLG14H3ORF58 coding downstream 40703 856513 ~ 889417 (+)
CI01000070_01288997_01292086 NA coding downstream 473090 1288900 ~ 1292211 (+)
CI01000070_01385458_01389948 ZIC1 coding downstream 568869 1384679 ~ 1390024 (+)
CI01000070_01560169_01561248 AGTR1B coding downstream 744143 1559953 ~ 1561501 (+)
CI01000070_01567837_01572943 CPB1 coding downstream 752027 1567837 ~ 1573021 (+)
G276274 NA non-coding upstream 77806 656663 ~ 676986 (+)
G276495 NA non-coding upstream 131768 622720 ~ 623024 (+)
G276458 NA non-coding upstream 238534 516039 ~ 516258 (+)
G276450 NA non-coding upstream 261584 492346 ~ 493208 (+)
G276560 NA non-coding downstream 37333 853143 ~ 855657 (+)
G276629 NA non-coding downstream 189389 1005199 ~ 1086191 (+)
G276694 NA non-coding downstream 341503 1157313 ~ 1158708 (+)
G276708 NA non-coding downstream 369156 1184966 ~ 1188624 (+)
G276714 NA non-coding downstream 383178 1198988 ~ 1271193 (+)
G276678 NA other downstream 310194 1126004 ~ 1126453 (+)
G276782 NA other downstream 591984 1407794 ~ 1410138 (+)

Expression


Co-expression Network