G282924


Basic Information

Item Value
gene id G282924
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4280668 ~ 4280944 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320659
CAAGAATGCAATTTTTTTCCCCAAAATATCCACACGATTGCAAATGTGACATTGATTTTATATAACAGTTCAACAAAAATTGCGTAATAATGAATCTCTGAACGAATCGTAAGAGTAAATGATTCAATGACCCATACATAGGCCCTGTCCCAAATGGCACACTTCTATGCACTTTCGGTCTTGAGGACTTACAATGGCTGCCGTGTGCGCGTGTCCGTTAAGTCCACCAGACCGTAGGGTGTCCCATTTGTCAATGTTAGGCTTCAGAAGGGTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320659 True 277 lncRNA 0.42 1 4280668 4280944

Neighbor

gene id symbol gene type direction distance location
CI01000071_04228627_04229463 PURBB, PURB, PURBA coding upstream 51097 4228627 ~ 4229571 (+)
CI01000071_04206342_04211122 NA coding upstream 69535 4206211 ~ 4211133 (+)
CI01000071_04163270_04188267 MXD1 coding upstream 90095 4163270 ~ 4190573 (+)
CI01000071_04129094_04161220 ADD2 coding upstream 119191 4129055 ~ 4161477 (+)
CI01000071_04113995_04118019 NA coding upstream 162430 4113847 ~ 4118238 (+)
CI01000071_04443263_04450257 GM10705, UBE2L3, BB_R111_JSM90EE7F, UB2L3, UBE2L3B, UBE2L3.S, UBE2L3A coding downstream 162242 4443186 ~ 4451260 (+)
CI01000071_04464134_04466967 SDF2L1 coding downstream 183190 4464134 ~ 4467233 (+)
CI01000071_04500188_04515251 TOP3B.L, TOP3B coding downstream 219244 4500188 ~ 4515251 (+)
CI01000071_04518557_04528364 NA coding downstream 237613 4518557 ~ 4528452 (+)
CI01000071_04534337_04569325 MAPK1.S, MAPK3, MAPK1, MAPK1.L coding downstream 253393 4534337 ~ 4569325 (+)
G282905 NA non-coding upstream 22975 4257138 ~ 4257693 (+)
G282903 NA non-coding upstream 23621 4256337 ~ 4257047 (+)
G282901 NA non-coding upstream 27709 4252555 ~ 4252959 (+)
G282898 NA non-coding upstream 30327 4250129 ~ 4250341 (+)
G282894 NA non-coding upstream 39585 4234434 ~ 4241083 (+)
G282928 NA non-coding downstream 3875 4284819 ~ 4285136 (+)
G282929 NA non-coding downstream 4424 4285368 ~ 4285609 (+)
G282801 NA non-coding downstream 147310 4428254 ~ 4429399 (+)
G282804 NA non-coding downstream 151443 4432387 ~ 4434454 (+)
G282991 NA non-coding downstream 154980 4435924 ~ 4436198 (+)
G282080 NA other upstream 1224137 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1452064 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2902998 1373996 ~ 1377670 (+)
G280443 NA other upstream 3358572 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3477351 791346 ~ 803317 (+)

Expression


Co-expression Network