G282991


Basic Information

Item Value
gene id G282991
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4435924 ~ 4436198 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320728
TATCACACCATATTGTGTCTATGTATTTTAAACATTTGAATGGACTGATAAAGGGAGCTGTGTATTTTTGTTGAAGTACAATGTCGTTTTGACCACAATAATGTACCAAATCTAACTCGTATAAATATTACAGTAGTATAGAAAATTACTATACATACATTTAAAGGTTAAATCGAAGTCCGAGCCTCCTGTACCCATTCTGTGATGCCAAACAACTTCCCTGTGCAAAGGATCATGGGGGCCCGAAGTGTCCATCAGTTGTACCTCACGAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320728 True 275 lncRNA 0.37 1 4435924 4436198

Neighbor

gene id symbol gene type direction distance location
CI01000071_04228627_04229463 PURBB, PURB, PURBA coding upstream 206353 4228627 ~ 4229571 (+)
CI01000071_04206342_04211122 NA coding upstream 224791 4206211 ~ 4211133 (+)
CI01000071_04163270_04188267 MXD1 coding upstream 245351 4163270 ~ 4190573 (+)
CI01000071_04129094_04161220 ADD2 coding upstream 274447 4129055 ~ 4161477 (+)
CI01000071_04113995_04118019 NA coding upstream 317686 4113847 ~ 4118238 (+)
CI01000071_04443263_04450257 GM10705, UBE2L3, BB_R111_JSM90EE7F, UB2L3, UBE2L3B, UBE2L3.S, UBE2L3A coding downstream 6988 4443186 ~ 4451260 (+)
CI01000071_04464134_04466967 SDF2L1 coding downstream 27936 4464134 ~ 4467233 (+)
CI01000071_04500188_04515251 TOP3B.L, TOP3B coding downstream 63990 4500188 ~ 4515251 (+)
CI01000071_04518557_04528364 NA coding downstream 82359 4518557 ~ 4528452 (+)
CI01000071_04534337_04569325 MAPK1.S, MAPK3, MAPK1, MAPK1.L coding downstream 98139 4534337 ~ 4569325 (+)
G282804 NA non-coding upstream 1470 4432387 ~ 4434454 (+)
G282801 NA non-coding upstream 6525 4428254 ~ 4429399 (+)
G282929 NA non-coding upstream 150315 4285368 ~ 4285609 (+)
G282928 NA non-coding upstream 150788 4284819 ~ 4285136 (+)
G282924 NA non-coding upstream 154980 4280668 ~ 4280944 (+)
G282992 NA non-coding downstream 60 4436258 ~ 4436556 (+)
G283004 NA non-coding downstream 32921 4469119 ~ 4469334 (+)
G283003 NA non-coding downstream 33407 4469605 ~ 4470442 (+)
G283005 NA non-coding downstream 34924 4471122 ~ 4471564 (+)
G283006 NA non-coding downstream 35421 4471619 ~ 4472426 (+)
G282080 NA other upstream 1379393 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1607320 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3058254 1373996 ~ 1377670 (+)
G280443 NA other upstream 3513828 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3632607 791346 ~ 803317 (+)

Expression


Co-expression Network