G284550


Basic Information

Item Value
gene id G284550
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 1333476 ~ 1333715 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU322515
AGGCATATTTTCTGCAAAGATATTTAACAAATTGTTTTACATTTACACCATGTTGATCGCTTCATGTGTGGTGCACTTGGAACTTTTTTTAACCAGATTGTTAATAAAGAGAATGTTACTTAAATCATATTGTAGTTAAGTTTTTAAGTTGACTAGTTAAACAGTAAAAAGAAATCGAAATCGTGAATCGGTCAATCATTCTGAAAAAATCGAGATTTTTTTTTTTTTGCCATATCGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322515 True 240 lncRNA 0.30 1 1333476 1333715

Neighbor

gene id symbol gene type direction distance location
CI01000072_01272628_01318779 PITPNM3 coding upstream 14397 1272530 ~ 1319079 (+)
CI01000072_01238939_01264489 NA coding upstream 68011 1238429 ~ 1265465 (+)
CI01000072_01183833_01210925 KIAA0753 coding upstream 121264 1183539 ~ 1212212 (+)
CI01000072_01163522_01163779 NA coding upstream 169517 1163008 ~ 1163959 (+)
CI01000072_01145519_01157117 NA coding upstream 175601 1145519 ~ 1157875 (+)
CI01000072_01334982_01348258 NA coding downstream 1267 1334982 ~ 1348258 (+)
CI01000072_01351729_01362820 NA coding downstream 16757 1350472 ~ 1363039 (+)
CI01000072_01391395_01404483 WDR81 coding downstream 55811 1389526 ~ 1406073 (+)
CI01000072_01406735_01412673 SERPINF2B coding downstream 73020 1406735 ~ 1413120 (+)
CI01000072_01413987_01424254 RPA1 coding downstream 80272 1413987 ~ 1424254 (+)
G284464 NA non-coding upstream 264318 1068520 ~ 1069158 (+)
CI01000072_00873737_00876816 NA non-coding upstream 459080 873737 ~ 876902 (+)
G284338 NA non-coding upstream 477599 855530 ~ 855877 (+)
G284296 NA non-coding upstream 587504 745722 ~ 745972 (+)
G284121 NA non-coding upstream 665465 667773 ~ 668011 (+)
G284559 NA non-coding downstream 48028 1381743 ~ 1442788 (+)
G284696 NA non-coding downstream 253436 1587151 ~ 1590509 (+)
G284694 NA non-coding downstream 323137 1656852 ~ 1696292 (+)
G284851 NA non-coding downstream 497953 1831668 ~ 1831971 (+)
G284859 NA non-coding downstream 546875 1880590 ~ 1880807 (+)
CI01000072_00338411_00351144 NA other upstream 982188 337071 ~ 351288 (+)
G284742 NA other downstream 647815 1981530 ~ 1985140 (+)
G285428 NA other downstream 2636542 3970257 ~ 3976214 (+)
G286470 NA other downstream 2835389 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 2891123 4224789 ~ 4268148 (+)
CI01000072_04338747_04342064 SDHD other downstream 3005004 4338719 ~ 4343266 (+)

Expression


Co-expression Network