G286005


Basic Information

Item Value
gene id G286005
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 2993769 ~ 2999495 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU324139
TGTGGATATATGTCTTATTATCTTAATCTGATTTTCATATACTTTTTCATACTTGACGCATCATTAAATAGGCAATATAAACGATGATAAATAAAAATGCATTCAGCACATTTTCATATTAATAAAATCTCAATATCTGTGATCCGAGTAACATTACAATTTTGTTCAGTGTTCTACGGAATATCTAGTTGGGACAGACAGCAGAATAGAATCAAGTGTTAGAGAGCTCTACAGGGATCATTGTCATTGTCCTGCCGGTGCTGACAGAGAGTGTGACGGTGCTGGGCAGAGGTGAGAGTGTTCTCGTTTGTTCCTTGCTGTTGTGTGTTGCATACTCTTCTCATTATCTCCCGACTGACAGCCTCATAGCTCACATTCCTCTCCGATCCAAATGCCATTTCTCTCTCTGTCTCTTCCCCAGACCAGTCTGCAGTGTCAGCTCTGCTTTAGTCTGTTTCTCCCTCCCCCTCATCGTGTTCTCCCACACAGTCGTGCACGCCGCCATAGTGGTCTTTTAATCCACACAGACACGTGTGCTGTGTCCTCTTCAGGACGTGCTGTAGCATGGACTCCTTGCACCACACCCCTTGCCGCCACAGGCCTGTACCAGCACCATCTGCAGAGCCTGTGCTATCACCTCATCCATCTCCTGCAGGGCAATTTCTGTATGCGAGACATGACACCGAATCTCCAGGTTATTATCTGCATTACCTGGAAAATGATAGTGGGAGTGAAAAGTACACTAGTAAAAGGTGAAAACAATCAGCCTCCCTTGACAGGGTGTGTAGACCACTGCTGGCTTCAGGCTACTTTTAAGAAGGGCTACAGCGTCCTCTTGTGCTTGTATGCTTGAATGCCAGTATAGCGAGAATTAAAATAGGAAATTTCGCCTCCTAGTGGCAGGTTATCACGTTACAGCTATGAAAAGGCACTCCCCTCCTCTCTCCATGGAGGAAATGATTGATTTTGGCCGTGATTCTTGGCTGAGACCATGAACGGTGCAGAACAGTTTGAGCTCGGCTGTGCACTGCAGTTTCCTGTTGCTTTAGGAAGAAACGCTTTGAACGGAGAATCATACTTTTTCTTTATTTTCTTATCTTTCTTTGACAAACACATATGGAAATATCAAAACAATAAATGACAGTAATAATATATCTTAATCCAGTGCACTTTAGCACTTACTCTAAATAAATATTAACACACGCAAAAATTTACTTGCCATGATGTCCAGTCAAACCTGTATGACTTTCTTTTTTTAATTCAATAGCTTTCTACCATATAATGAAAGTAAATTTTACAAAAATTTAGAGAGAAGAAGGTTTTGCTCTGTTCCCTACACAAAGCTATCATGTTTTCAAAAAAGTATATACAATATACATGGAAATATACTAAACCATTCTCTTTTACTCTTTATGCATATATGCTACTGTTAAAAAACAGTTTCAGCTGTTTTTTAAAATCTCTCTTATGTTCACAAGAATGCTTTTATTTGATCAAACATAGGGATGCATGATATGTCTGCTACCATATCGGTATCTGCTGATATATGTTAATTTTGAATGTTATCGTTATCGGCCCGATAAGAAAATTTGGCCGATATATTAAAGCTGATAAGAAATGGATTATATTTCCTTCAGCTGAGACACTTTAGATGTGCACTGTCCACCATTTTGAATTACTTAAAATATGATTGAAATCACATCAAAAAGGAAAATACAGTTAAGTACAACATAAAACGCAAGTCTGTCATATAGGCTACATAATATTATAATGAGAACATTATAGTTGTGTGCTTGGGACATGGCTTTTAATGGTGAGTCTTTTGTTTTTTTTGTAATCAGACTCACAAAAACTATATAATTTTTTTATTTAGATTTATCGGCCAATATATCGGTTATCGGCTTTCAAATATAAAGAATTATCGGTATCGGCCAAAATGTCCATATTGGTGAATCCCTAATCAAATACAGTAAAAACAGTTATTTCAAATAGTAATAATAATTCACAATATTATTGTTTTCTATTTGAATATATTTTAAAATAAGCAATTTTTTCTTGTGATGGCAAAGCCGAATTTTCAGCATCATTACTCCAGTCTTCAGTTTTTTTGGCGCACCAAAAATATTCTCGTCGCTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGTAGGCCTCTCTGAGCCATCGGATTTCAACAAAAATATCTTAATTTGTGTTCCGAAGATTAACAAAGGTCTTACGGGTGTGGAACGGCATGAGGGTGAGTAATAAATGACATTATTTTCATTTTTGATTTAATTTAAATTATCGCCAACTAAAATATCCACGTTGTCACTTAGTACAACTTAAAGTTGACTAAACTTAAAATTTTATGGCAGCACGAACACTTATTTTTTAAAGTTGAAACAACACATTTTTTTTTTTACGTTGTTCAAAAGAACAGCATTTATTTGAAATAGATTTTTTTTGTAACAATGTTGAAGTCTTTACTGTCCCTTTTCAGCAATTTAAAGCATCCTTGATGACCCCAAACTTGTAAATCTCATGGACTACTGTTTAATGATTTTGGAGCTTGACAGCTCCAGTCTCCATTCACATAAAAGAGTAAGAGATAATCTTCAAAACTTCACCATTTTTTGTTGCCACAGTAGAGCGAAAGGCACATGGGTTTGGAACGACATCATGGTGAGTCTTTGGTGGAGTCAGTCTTTGGTGCTCAGCTTTCACATTGAGATATATATTGAGATATATATATATATATACGGCTTTTATTTCCAGTCTGCTCTGCAGTATTGAAATCACTCTGTGTAGGAAGTGCCAAGGCCTTGCGTCATTTCCTCAACCTTCTCTCTCAGCGCTTCTGTTTTTCTCCTCTGTTTCCCCTCTCCGCCCTACACCTCTGTATCTCTCCGAAAAGAGAAAAACGCTAAGCCAGCACTCAAGGCCTTGATGCTCACTCCACATCTTCCAACAACAAAGTTTACACCTTCGTTGAGAGCTTCTTTTAAACCAGCAGACACCCTCACGTGTACACGCCTGCACTGGACCAACGTTTGCTCTGGAGCAGCTGAGCAGGAGAAGCAACTGCGGAGCTGTCCATCACCCAGCCTACATTTTTGGGGGTGGGGAGAAAGCAGGACTGTTGCAGCGGTGGTACTTGGGTTTTTTATTTTTAGACTATTCTCGACCCTCTACCACGACAGCTGTCTCTTTCCTCCTCCTTCTCTGACAGAGCAACGTCAGGAATAGCCTATCGCTTTGCACCTCTCAAAACTAGGGCTGCCGGTTAGTGACGTGAGACTTCTGGTTCTCAGGACTGTCTCGAACACACACATAAACGTGTCTCGCCGCTTTCTTTTGCCGCTCTGCTCCACTCTGACCTGGGTAAGGGAGCGACGGTAACTGTTTGGAGGTGCTGCAGAGGATCTCAGGTAAGGTGGCAGGCTTTGCTCATGGTTCTGGATGGGAGAATCTGTAGATCTAGACCTGTGGAGGAGTCTGTTGGCTCAGAGTTCTGCTGCAGTCTGGACTCAGGCCTGCTCTGGCACCTATTTTTAGGCTTGAGTGTGATGGCATGCCAGAAGCAATGATCGAGACAGCTAGTGCTAATGCTAAATTCAGTGAGTTTTGCAATTTCACTTGAAAATGTGAATTCAGTTAAGGGTTTTCTTGTACTTTAGTGTGTTAACGTGGCTGGTTTGTTTGGATTGTGCTGTGTAAGTTGGTATTTAGAGACTAGAATGAAGCTCTGGATTGGTATTACTGAGGTTAAGTGCTGAAGTCCATCAAGGCTTTTGTTTGAGTTGGTTTGCTCTTGTAGAAAAATGTAGTGCCATTTTAGCCATTATGTCTTGGTTATTGTACTCTTGAGATGAATGTTTCAAATGGGTCTTATTTTTGGATGTCTCATGGCTTTTTTTCTAATGCTTTTGAACTGTTCTATGACTGTCGAGTGTTTGATAGATGAAGTCAGTGGGTTATTTTGTGTATACAGTCATTGGATCATATGCTTCACAGTCTGTCTGCAAAAGCTTTTATTGATGTGGCCATAAACTTTCAGCTGTTCAATTATGTCTCTTTTGTTGAGCTAAATTGCTGGCTTGTATTTATTCTGTTTCGGTGTAGGTTTCTTCATTTCTCAGTTGAATTATAATTAGCTTTAGGAAGTGAATTTAATTTTGTTAGCTGAATTGAATTTAATCTCCATTAATGCCTAAATTGGCCTTGGCATTAATTCCATCCCTTTTGTTACTGTATATGTCCTCGAGAAACCTCTAGAATGAAAGCTAATCAAGTTTACCAGTCCTGTGTTGAGTGATAAGACCCATTTAATTTATATATGCTATGAGTAGTCTTGTATACATGGACAAATTATGTATTTTATCTTTTAACACTGTTAATTGCAATTGTTGATACTAGAAATGTGTATCCAGTTGCATTTTTTTCCTGTTAGGAAAAAATAGGGCCGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324139 True 4541 TUCP 0.39 2 2993769 2999495

Neighbor

gene id symbol gene type direction distance location
CI01000072_02653471_02758823 SEZ6, SEZ6B coding downstream 234946 2653471 ~ 2758823 (-)
CI01000072_02633510_02645090 NA coding downstream 348377 2632837 ~ 2645392 (-)
CI01000072_02628853_02630214 DHRS13B, DHRS13 coding downstream 363555 2628083 ~ 2630214 (-)
CI01000072_02617680_02621357 NA coding downstream 372235 2617309 ~ 2621534 (-)
CI01000072_02572648_02594029 SMTNL, SMTNL2 coding downstream 399740 2572648 ~ 2594029 (-)
CI01000072_03049529_03055114 NA coding upstream 48507 3048002 ~ 3055582 (-)
CI01000072_03114079_03114839 IFT20, IFT20.S, IFT20.L coding upstream 114229 3113724 ~ 3114839 (-)
CI01000072_03144427_03154133 SAE1 coding upstream 144823 3144318 ~ 3155095 (-)
CI01000072_03189624_03195527 KLC3 coding upstream 190056 3189551 ~ 3195527 (-)
CI01000072_03210624_03244667 MARK4, MARK4A coding upstream 210724 3210219 ~ 3244667 (-)
G286140 NA non-coding downstream 85975 2907354 ~ 2907794 (-)
G286139 NA non-coding downstream 87317 2906213 ~ 2906452 (-)
G286135 NA non-coding downstream 91778 2901751 ~ 2901991 (-)
G286134 NA non-coding downstream 92582 2900975 ~ 2901187 (-)
G286128 NA non-coding downstream 117744 2875681 ~ 2876025 (-)
G285998 NA non-coding upstream 243 2999738 ~ 3009578 (-)
G286142 NA non-coding upstream 34792 3034287 ~ 3034608 (-)
G286144 NA non-coding upstream 56496 3055991 ~ 3072797 (-)
G286166 NA non-coding upstream 104235 3103730 ~ 3104264 (-)
G286172 NA non-coding upstream 120266 3119761 ~ 3120001 (-)
G285752 NA other downstream 823111 2168048 ~ 2170658 (-)
G285766 NA other downstream 985460 2005551 ~ 2008309 (-)
CI01000072_01596829_01610605 NA other downstream 1365874 1594111 ~ 1627895 (-)
G285534 NA other downstream 1638837 1335507 ~ 1354932 (-)
CI01000072_00281180_00284855 NA other downstream 2709490 280703 ~ 285182 (-)
CI01000072_03972493_03983836 SPA17 other upstream 970775 3972401 ~ 3983836 (-)
G287021 NA other upstream 1386650 4386145 ~ 4394223 (-)
G287264 NA other upstream 2381225 5380720 ~ 5382001 (-)

Expression


Co-expression Network