G286663


Basic Information

Item Value
gene id G286663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4612124 ~ 4612413 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU324960
CCAAAACCCATTGTGCGTTGGACAAGGATTCAAATAGAACTACAAACACAGCGGATGTGCGAGATTGACGGTTAAGGAGTTTCAGTGATTAATAATTAGCATCTAACCTAAATAAAAAAATATTTATTTAATGTTATCCACATTATATTTAATCTGCAACAACCTTGTGAACTTTTAAAGATATGTTTGGTCATTAACTTTTTAAATGCATCACAATGGAAACCTATTAGGAGTTTTCCGCATGAAAGACTCGTGACTGGCAGATGAACATGCTAATACATTTCTCTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324960 True 290 lncRNA 0.34 1 4612124 4612413

Neighbor

gene id symbol gene type direction distance location
CI01000072_04480997_04481407 NA coding upstream 129368 4479928 ~ 4482756 (+)
CI01000072_04471801_04478691 NA coding upstream 132813 4470142 ~ 4479874 (+)
CI01000072_04353484_04415940 SORL1 coding upstream 196184 4352864 ~ 4415940 (+)
CI01000072_04346264_04350998 BCO2B coding upstream 260754 4346164 ~ 4351370 (+)
CI01000072_04338747_04342064 SDHD coding upstream 269753 4338719 ~ 4343266 (+)
CI01000072_04635652_04646429 A2ML coding downstream 23179 4635592 ~ 4646465 (+)
CI01000072_04648326_04662198 A2ML coding downstream 35860 4648273 ~ 4662247 (+)
CI01000072_04665875_04678048 A2ML coding downstream 53409 4665822 ~ 4678076 (+)
CI01000072_04683704_04714952 A2ML coding downstream 70413 4682826 ~ 4715127 (+)
CI01000072_04721539_04727645 A2ML coding downstream 108701 4721114 ~ 4727738 (+)
G286625 NA non-coding upstream 100031 4511894 ~ 4512093 (+)
G286621 NA non-coding upstream 107810 4503863 ~ 4504314 (+)
G286609 NA non-coding upstream 139485 4472148 ~ 4472639 (+)
G286664 NA non-coding downstream 5436 4617849 ~ 4618278 (+)
G286653 NA non-coding downstream 5984 4618397 ~ 4620956 (+)
G286651 NA non-coding downstream 11199 4623612 ~ 4626351 (+)
CI01000072_04738344_04748841 A2ML non-coding downstream 135993 4738291 ~ 4748901 (+)
G286675 NA non-coding downstream 156634 4769047 ~ 4769302 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other upstream 379703 4224789 ~ 4268148 (+)
G286470 NA other upstream 436473 4169104 ~ 4175651 (+)
G285428 NA other upstream 635910 3970257 ~ 3976214 (+)
G284742 NA other upstream 2626984 1981530 ~ 1985140 (+)
CI01000072_04757636_04762507 NA other downstream 147898 4757583 ~ 4762510 (+)
G286564 NA other downstream 190040 4802453 ~ 4802948 (+)
CI01000072_04831647_04834194 NA other downstream 216985 4831557 ~ 4834707 (+)

Expression


Co-expression Network