CI01000072_04648326_04662198 (A2ML)


Basic Information

Item Value
gene id CI01000072_04648326_04662198
gene name A2ML
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4648273 ~ 4662247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_04648326_04662198.mRNA
CTTTAAAAGAGACGGTCGAGTTCCTCTCGTGACCTGGATGAGCGCTCATCATCATGGCTCTGAATTTCAGCTGCTGTTGGAAAGGGCTCCTTCTGCTCTCTTTCCTCCTGATCTGTGTCAATGGACAAACATCAAGGCCATCTTTCATGGTGACGTTTCCTGCAGTGATCGAGTCTGGATCTGAGGCCAAACTGTGTGCAAGTCTTCTCAAGCCCAATGAAAGCCTTGTCATGAACATTCATCTGGTTCATGGTAACCAGAGCACTTTACTGCTGCAGGAGAAAGCTGAAGAAGAGTTTCATCGCTGCTTTAACTTCAAGGCTCCTCTGGTCGAAGCAGAATCAGTACAGAAAATGAAGGTTGAACTTCAGGGAGAGACTTTCAAGATGACTGAAGAGAGAAAAGTCATGTTCAAGCCTTACCATCCTCTGACCTTTATCCAGACTGATAAACCCATCTATATTCCAGGACAGACAGTGAACTTCAGAGTTGTTACCATGGATACAAACTTTGCACCCCTTGATCAGCAGTATAGTACAGTGATTCTTGAGGACAGTCGAGGTAACCGGATTGGTCAATGGACAAATGTTTCTTCAACAAGGTGGATTTTGCAGCGTTCTTATGAATTAAACCCAGAGGCCCGTCAAGGCATGTACAAACTGAAGGCTTTTATTAGTGACAGGATGATCTCACATAATTTTGAGGTGAAAAAATATGTTTTGCCTAAGTTTGAAGTTACTGTAAAAAGCCCAAATGAAGTACATGTTGAAGAAGACGAACTGATAATTGAGGTTTGCGGAAAATACACTTACGGACAGCCTGTACCTGGTAAATCATGGGTGAAAGTGTGTCGTAATAATTTGCCCTACCTTACCCATCACACCAATTCAGTGTGTTTAGAGGAAACCATCGAGATAAAAAAGACAGGCTGTGCCATCCATACCTTAGATGCATCAGTCTTTTTGAACGCCACACTAAACGACAGGCTGGAGAATTCTCTTCGTGTTGAGGCAATGGTTACAGAAGAAGGAACAGAGATCACCATGACAAAATCTGAATCTGTATCTCTCACTTATGAAATTGGTAAAGTCACATTTACTGACCTGCCCAAAACATATGAACATGGATCAGTTATAGAAGGAAAAATCAAACTCTCAGATTTCAAAGGCGCACCAATTCAAAACAAAGAGGTTTATCTTATGGAGGGTCACACTTGGTCCCCAAAACTGCTCCTAAATCTCACTACAGACAGCGATGGACTGGCCAGCTTCTCTTTTAATACATCCAGTCTTTCTAAAAGTGATATTAATCTGATTGCCAGTGTCTATCCAGAGGTCCATTATTATGGCCACAACAGGCCTTACATCTCTGCAGATATAAAACCAGTTCGGCTCTTCCAGCCTGCTGCTCCATTCAATCCAACACTAAGTGAACTGATTATAGAGAATACTGAGCAACCATTAAAGTGTGACTCTGAGTTTACAGCCACCATCAAGTATTATTTTGTTGGAGAGACTGTTGAAGACTTCAAAACTGACATTATCTATATGGTCTTGTCCAGAGGAGTGATTGTTCATCATGGATATGAGAAGGTTGAAGTGAAATCTTCTAATGGAGTAGCAAGTGGCACAATGTCATTCAAACTGTCTATTAGTGCAGATCTGGCTCCAGTAGTGCAGATTCTGGCGTACTGTGTTCTGCCCAGTGAAAATTTTGTTGCTGGTAGCGGAAATTTCGACATTGAAAAGTGTTTCAAAAACAAGGTGTCTCTGCAGTTTTCTCCTGCTAAAGCAGTTCCTGGTGAGAAAAACACTCTCCAGCTCTCAGCTCAGCCGGGTTCACTGTGCGGCCTCAGTGCTGTAGATCAGAGCGTCCTGATCCTGAAGCCAGGAGAACGTCTGGATACTGACAAGATCTTCAACCTGCTGCCAGTGCAATCGGGGTCATATTACCCTTATACTGTTGAAGATGAGCAGAAGTGTCTGCATGTGAGATCCCGTCGAGCTGTGCCAACAGACGACGCCTATGAATCCTTCAAGAGAGTGGGATTGAAGATGGCAACAAATTTGGATGTGCGAGTCCCTCCGTGTCTGTCATACAGAGGATTGACGTATCACCGATACCATGGTGAAGTGATGTATCATTATCGTCATCCAATGAGTGGGACGCATTTATTAGGGGGTGATTCTGGTGCTAACAGAGATTCTCCAGTAGTGACGATTCGGACCATCTTTCCAGAAACGTGGATCTGGGAACTTGCTGAAGTGGGGGACTCTGGATCAGCTCAGGTTCCTGTCACAGTTCCTGACACCATCACCTCTTGGGAGACGGAGGCCTTCTGTCTGTCCTCTGAAGGTCTGGGTCTGGCTCCTCCTGCTCAGCTGACAGTTTTCCAGCCCTTCTTCCTGGAGCTCTCTCTGCCTTACTCCATCATCCGTGGGGAGATCTTTGAGCTGAAGGCCACTGTCTTCAACTATCTGTCCAAGTGCATCATGGTTAAAGTGACTCCAGCTCCTTCCTCAGACTACACTCTCAAAGCCTCTGATGTTCAGTATTCATCCTGTCTATGTGCTAATGGAAGAAAAACCTTTAAATGGATCCTCACTCCTTCTGTTCTTGGAGTCTTGAGTATTACAGTCAGTGCAGAGGCAGAAGCGTCCCAGACTGTGTGTGACAATGAGATTGTGAGCGTCCCAGAGAGAGGACGCATTGACACGGTCACACGAAGTCTACTCGTACAGGCGGAAGGAACTGAAAAGACTGAGACTCACAGCTGGTTACTGTGTCCAAAGGGTGACAGTCTCTCAGAGGAAGTGGCTCTGACTCTTCCTAAAGATGTGATAGAGGGATCAGCCAGATCCACTGTTTCAGTCATTGGAGACATATTGGGTCGTGCACTGAAGAATCTTCATGGATTATTACGGATGCCGTACGGCTGTGGGGAACAAAACATGGCTCTTCTTTCTCCCAATATTTACATTCTGCAGTATCTGGAGAACACGAAGCAGCTCACCTCAGCCATCCGAGAGAGAGCCACAGACTTCCTGAAGAGCGGATACCAGAGACAACTAAATTACAAGCATGACGATGGAGCATACAGCACATTTGGTTACGGAGAAGGGAATACTTGGGACTCTGGATCAGCTCAGGTTCCTGTCACAGTTCCTGACACCATCACCTCTTGGGAGACGGAGGCCTTCTGTCTGTCCTCTGAAGGTCTGGGTCTGGCTCCTCCTGCTCAGCTGACAGTTTTCCAGCCCTTCTTCCTGGAGCTCTCTCTGCCTTACTCCATCATCCGTGGGGAGATCTTTGAGCTGAAGGCCACTGTCTTCAACTATCTGTCCAAGTGCATCATGGTTAAAGTGACTCCAGCTCCTTCCTCAGACTACACTCTCAAAGCCTCTGATGATCAGTATTCATCCTGTCTATGTGCTAATGGAAGAAAAACCTTTAAATGGATCCTCACTCCTTCTGTTCTTGGAGTCTTGAATATTACAGTCAGTGCAGAGGCAGAGGCGTCCCAGACTGTGTGTGACAATGAGATTGTGAGCGTCCCAGAGAGAGGACGCATTGACACGGTCACACGAAGTCTACTCGTACAGGCGGAAGGAACTGAAAAGACTGAGACTCACAGCTGGTTATTGTGTCCAAAGGGTGACAGTCTCTCAGAGGAAGTGGCTCTGACTCTTCCTAAAGATGTGATAGAGGGATCAGCCAGATCCACTGTTTCAGTCATTGGAGACATATTGGGTCGTGCACTGAGGAATCTTCATGGATTATTACGGATGCCGTACGGCTGTGGGGAACAAAACATGGCTCTTCTTTCTCCCAATATTTACATTCTGCAGTATCTGGAGAACACGGAGCAGCTCACCTCAGCCATCCGAGAGAGAGCCACAGACTTCCTGAAGAGCGGATACCAGAGACAACTGAATTACAAGCATGACGATGGAGCATACAGCACATTTGGTTACGGAGAAGGGAATACTTGGTCTTTTGGCAGAGCACAGAAATACATATATATTGAACCACGTAATATTCAGAGTGCAAAAGAATGGTTAATAAACAGACGGGATTCAGATGGCTGTTTTATCCAGCAGGGAAGACTGTTCAACAACAGAATGAAGGGTGGAGTGAATGATAATGTGACCATGACTGCCTACATTACTGCATCATTGCTTGAACTGGAAACTCCAGTCACAGATCCTGTCGTCAGTAAAGGTTTGTCATGCTTGAGGTCTGTCATTGAGGATGTCAAAAACACTTACACCACTGCTCTGCTCACTTACACTTTCAGTCTGGCTAGAGACACGGTCACTCGACAGCAGCTTTTCAAGAAACTGGAGGATGTTGCTATTTCAGATGGGTCTCATCTCCACTGGTCTCAGTCTGCATCTGCTGATGACTCTGATTCTCTGGCAGTGGAGATCAGCTCATATGTGCTGCTAGCTGTTCTCACTGCAGATTCAGTCACTACAGCTGATCTGGGCTATGCTAACAGGATTGTCAGCTGGCTTGTGAAGCAGCAGAATGCCTATGGAGGATTCTCCTCCACACAGGACACAGTAGTGGCTCTTCAGGCTCTGTCTTTGTACGCCACCAAAGTGTTCAGCTCTGACGGCTCCAGCACAGTGACTGTCCAATCAGCAGGAGACACTCACCACTTTGATGTCAATCAGGACAACAAGTTACTGTACCAGGAGAAGCAGCTGCAGAGTGTTCCAGCCAAATACAGCATTGAAGTGAAGGGCTCGACCTGTGTGTCTGTGCAGATGGCTCAGTTCTACAACATTCCCACTCCTACTGAAGCTAAAACATTGAGCATTGACGCTAAGATTGAGGGAGATTGCAAGAAAACCTTGGGACAGTACCTATTGTTAAATTTCACTGTGAAATATGATGGTCCACAGGCAAGAACTAACATGGTCATTGTGGATATTAAACTCTTGTCAGGATTTACAGCTGATACATCAATGCTTGAACCTCAAAGCACTTCAAGTACATCACTTGTGGAACGGGTCGATTCTAAAGATGATCATGTCATCATATATTTGAAAGAGGTTCCAAAAAATATTGCAGTCAGTCACCAGTTACAATTAAAACAGATTCTTCCAGTGAAGAATCTCAAGCCAGCTGTGATTAAAGTGTATGATTACTACCAAACAAGTGATCTGTCAGAGACTGAGTATTCATCCCACTGTGAATAAATTGTCATGCTTCCGTTATGCAGCTTGTATAAATATGTTTGAATGCCGA

Function

symbol description
a2ml Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within liver development. Predicted to be located in extracellular space. Is expressed in gut; liver; yolk; and yolk syncytial layer.

NR:

description
A2ml protein, partial

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG:

id description
K03910 A2M; alpha-2-macroglobulin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_04648326_04662198.mRNA True 5256 mRNA 0.45 41 4648273 4662247

Neighbor

gene id symbol gene type direction distance location
CI01000072_04635652_04646429 A2ML coding upstream 1808 4635592 ~ 4646465 (+)
CI01000072_04480997_04481407 NA coding upstream 165517 4479928 ~ 4482756 (+)
CI01000072_04471801_04478691 NA coding upstream 168962 4470142 ~ 4479874 (+)
CI01000072_04353484_04415940 SORL1 coding upstream 232333 4352864 ~ 4415940 (+)
CI01000072_04346264_04350998 BCO2B coding upstream 296903 4346164 ~ 4351370 (+)
CI01000072_04665875_04678048 A2ML coding downstream 3575 4665822 ~ 4678076 (+)
CI01000072_04683704_04714952 A2ML coding downstream 20579 4682826 ~ 4715127 (+)
CI01000072_04721539_04727645 A2ML coding downstream 58867 4721114 ~ 4727738 (+)
CI01000072_04738344_04748841 A2ML coding downstream 76044 4738291 ~ 4748901 (+)
CI01000072_04757636_04762507 NA coding downstream 95336 4757583 ~ 4762510 (+)
G286651 NA non-coding upstream 21922 4623612 ~ 4626351 (+)
G286653 NA non-coding upstream 27317 4618397 ~ 4620956 (+)
G286664 NA non-coding upstream 29995 4617849 ~ 4618278 (+)
G286663 NA non-coding upstream 35860 4612124 ~ 4612413 (+)
G286625 NA non-coding upstream 136180 4511894 ~ 4512093 (+)
G286675 NA non-coding downstream 106800 4769047 ~ 4769302 (+)
G286676 NA non-coding downstream 107860 4770107 ~ 4770393 (+)
G286595 NA non-coding downstream 143431 4805678 ~ 4805882 (+)
G286565 NA non-coding downstream 171398 4833645 ~ 4895601 (+)
CI01000072_04338747_04342064 SDHD other upstream 305007 4338719 ~ 4343266 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other upstream 415852 4224789 ~ 4268148 (+)
G286470 NA other upstream 472622 4169104 ~ 4175651 (+)
G285428 NA other upstream 672059 3970257 ~ 3976214 (+)
G284742 NA other upstream 2663133 1981530 ~ 1985140 (+)
G286564 NA other downstream 140206 4802453 ~ 4802948 (+)
CI01000072_04831647_04834194 NA other downstream 167151 4831557 ~ 4834707 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009184 si:dkey-105h12.2 coding NC_007126.7 CM002899.2 21220744 ~ 21239416 (-)