G286565


Basic Information

Item Value
gene id G286565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4833645 ~ 4895601 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU324853
TGTGTGTGTGTATATATATAGAGTGTGCAATGATAAATAAGGGGATTTTAGTTGAACTCCTGTCTGTTCATATTGTACTGTCATGTGGCTTCTAGCAATTCAACATTATTGCTAATGGTATCAAAATATCTGCTTGTTGACACTAGTCTGAAGTTTCTACTGGCGTGTAACATTCTTCAAAAAGTTCTTTCTGTGCTGCTGTGATTGTGACTTTTTTCAGTAAATGGGGTCAGGAGACTCATCCGATCTGCTCTGAACTGGCCATGATTTATTTTTCCACTGTGAAATCTGTCTGTTTAACGATTTAACACGCCTTTGTGAAAACACATTTCCGAAATCACGAAGAAAAAGCCGGACTAATTTGATATCTTATGACACATTAGCACAATGGCTCCAAGTAAACATCATCGCCATTATCTGGAGGGAACGTCTGTCCTCCGTTCTTCACTTTTATTGAGTTTGAGACTTTGTGGTTCGTGCAACAATGTGAAGTTCCAAACACAGGAACATGGATTTTCTCATCTTCAGACCTCCTCATTGTTAGCTAACATTAAGTAATAGCCTAGTACGACTCTTATTTTAAACCTTTTTGAGACTATTATTGATAGAATAATGGGAGAGGTCAAAAATATAAATGCACTGCAATCTTGTACATTCACACTTCCCTACTCTCCTTCATTTCAGCTGTTGTCAGCATCTAGTTCTGAGATTCTAGACACCAGGCCTCACATGTCTGATGACACAAGGAAGTAAATGTGTCTCAAAAGTTTGCTCAATGTAAATAAGAGATTATCTTGCTGTTTCCTAACCTACTTGTTTCCCTTGGACTCAGCTTTCTATCTCACATTATCAGCTGGATGGTTCTCTTTAATCAGCAGGCGTGAGGAAACACTGACCAGGAAAATGCTTGCCTGGCGAAATGCTTTGGCCCCGCACTTCTGAGTCTGTGTTCATGACGTTTTTGTTCTTCTGACTCGTGTTGAATTCTCGTTCCGTTCTTCTCTCACTTCTCCATATCAAAGCAGATGGAAAATCAGTTCTGGCTGTCTCTGGTTTTTGCTGATTAGATCTAGTGGAACAATGGGTTCAGAAACATCTGAAATAGAGCTACTCGTTCATCTGAAGAGACCTAATATGTAAATCTGACAAAACCTGTCAAGAACATCTACAAGTCATATTTCAGCCCAAAAGCAAAGAAAAAATATTTTGCATACAGAAAATGGAGGCTTTTTTTAGGTCCATAACATGTTTTAATTGGTATTTTATTTATAAATAAGTATACACCACTATTCATAAGTTTGGGGTCTATAAGATTGTTTTTGAAAGTCTCTTATGCTCACCAAAGCTGCATTTAATCGATCAAAAATGTGATATTTTGAAATATTATTACAATTAAAGTAATTCTTTTCTATTTTAATATATTTTAAAATGTAATTTATTCCTGTGATGCAAAGCTGAATTTTCAGCATCATTACAGAAATCATTCTAATACGCTGTGTTGGTGCACAAGTAACATTATGTTTTATTAATTATTGAAATAAATATTATTATTATTTTGAAAAATTGCTGCCTAATGTTTTTGTGGAAACTGATCATTTGTTTCAGGATTCTTTGATGAATAGAAAGTTAAAAGAACAGCATTTATTTGAAATAGAAATCATTTGTTATATCATTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324853 True 1677 lncRNA 0.35 2 4833645 4895601

Neighbor

gene id symbol gene type direction distance location
CI01000072_04790857_04794136 NA coding upstream 39251 4789971 ~ 4794394 (+)
CI01000072_04778819_04782897 NA coding upstream 50198 4778819 ~ 4783447 (+)
CI01000072_04757636_04762507 NA coding upstream 71138 4757583 ~ 4762510 (+)
CI01000072_04738344_04748841 A2ML coding upstream 84744 4738291 ~ 4748901 (+)
CI01000072_04721539_04727645 A2ML coding upstream 105907 4721114 ~ 4727738 (+)
CI01000072_04924865_04927684 PITPNAA coding downstream 29264 4924865 ~ 4928530 (+)
CI01000072_04974135_04987086 ANKRD13B coding downstream 78534 4974135 ~ 4990194 (+)
CI01000072_05082925_05093301 NA coding downstream 186750 5082351 ~ 5093789 (+)
CI01000072_05115672_05132153 NOVA2 coding downstream 219958 5115559 ~ 5132273 (+)
CI01000072_05256653_05265169 GIPR coding downstream 360776 5256377 ~ 5265203 (+)
G286595 NA non-coding upstream 27763 4805678 ~ 4805882 (+)
G286676 NA non-coding upstream 63252 4770107 ~ 4770393 (+)
G286675 NA non-coding upstream 64343 4769047 ~ 4769302 (+)
G286651 NA non-coding upstream 207294 4623612 ~ 4626351 (+)
G286573 NA non-coding downstream 7379 4902980 ~ 4906118 (+)
G286695 NA non-coding downstream 95760 4991361 ~ 4991885 (+)
G286722 NA non-coding downstream 137939 5033540 ~ 5033825 (+)
G286732 NA non-coding downstream 156447 5052048 ~ 5052262 (+)
CI01000072_04831647_04834194 NA other upstream 1857 4831557 ~ 4834707 (+)
G286564 NA other upstream 30697 4802453 ~ 4802948 (+)
CI01000072_04338747_04342064 SDHD other upstream 490379 4338719 ~ 4343266 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other upstream 601224 4224789 ~ 4268148 (+)

Expression


Co-expression Network