G286782


Basic Information

Item Value
gene id G286782
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5216712 ~ 5217096 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU325098
TAAAAATAGTAAAAAAAACAAACAAAGAAAAACTTTACAATTTAATTGAATTTAACACTATATTAAGTGGTAACCTGGTTAATGGATTTCTTTATGAAAGTTTAATGAGATTGTTCCAGTGGTTGCTGTACAGCTCTGATAGGATCTCAGTCAATAACACTTTTATTGACAGATGTCTAGCTTGAACATCAGTGTTTACCTTCCTTCCTGGAACTTCATGTATACACACCATAAATTATTTATTAGTATTTGATCACATTGTTCCTAAGCCTTCTTGGTGTGTGCACAACAACTTACTACACACTTAGTAGTAGAAAATAATGAAAATAATGTCATTAATTACTCACCCTCATGTCGTTCTACACCCGTAAGACCTTCGTTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325098 True 385 lncRNA 0.32 1 5216712 5217096

Neighbor

gene id symbol gene type direction distance location
CI01000072_05115672_05132153 NOVA2 coding upstream 84439 5115559 ~ 5132273 (+)
CI01000072_05082925_05093301 NA coding upstream 122923 5082351 ~ 5093789 (+)
CI01000072_04974135_04987086 ANKRD13B coding upstream 227434 4974135 ~ 4990194 (+)
CI01000072_04924865_04927684 PITPNAA coding upstream 288182 4924865 ~ 4928530 (+)
CI01000072_04891865_04915635 SLC43A2 coding upstream 301026 4891865 ~ 4915686 (+)
CI01000072_05256653_05265169 GIPR coding downstream 39281 5256377 ~ 5265203 (+)
CI01000072_05285816_05295678 CLIP3 coding downstream 68679 5285775 ~ 5296457 (+)
CI01000072_05315380_05336326 SYNE4 coding downstream 98284 5315380 ~ 5336957 (+)
CI01000072_05348632_05350857 NA coding downstream 131464 5348560 ~ 5351837 (+)
CI01000072_05367941_05386812 NA coding downstream 150845 5367941 ~ 5387212 (+)
G286778 NA non-coding upstream 8610 5207377 ~ 5208102 (+)
G286779 NA non-coding upstream 14440 5201975 ~ 5202272 (+)
G286776 NA non-coding upstream 15303 5201174 ~ 5201409 (+)
G286728 NA non-coding upstream 69173 5143544 ~ 5147539 (+)
G286746 NA non-coding upstream 89480 5122881 ~ 5127232 (+)
G286783 NA non-coding downstream 463 5217559 ~ 5217803 (+)
G286784 NA non-coding downstream 1247 5218343 ~ 5218542 (+)
G286785 NA non-coding downstream 2404 5219500 ~ 5219712 (+)
G286786 NA non-coding downstream 3117 5220213 ~ 5220740 (+)
G286787 NA non-coding downstream 5144 5222240 ~ 5222439 (+)
CI01000072_04831647_04834194 NA other upstream 384924 4831557 ~ 4834707 (+)
G286564 NA other upstream 413764 4802453 ~ 4802948 (+)
CI01000072_04757636_04762507 NA other upstream 454202 4757583 ~ 4762510 (+)
CI01000072_04338747_04342064 SDHD other upstream 873446 4338719 ~ 4343266 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other upstream 984291 4224789 ~ 4268148 (+)

Expression


Co-expression Network