CI01000081_01029679_01036021


Basic Information

Item Value
gene id CI01000081_01029679_01036021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000081
NCBI id null
chromosome length 1644768
location 1029679 ~ 1036116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000081_01029679_01036021.mRNA
TGCTGGAATCAGGACTGAATACAAATTTTTCTGATGTAAAAGTGTCTGTTACTGACTGTCCAGATCTTACACACGAGCCTTTCAGGTTTCCTGTCAAGGGTATTTGTGGCAAACCACGTATTACTGATGTGGGAGGTGTACCCTATCTGATTCCTCTGGTCCGACTGGACAAGGTTTACAACATGAACCTTGTGTCCAAGGAGGTTGAGCTGCCTGGTGCATTTATTCTTGGTGCCGGTGCTGTCTCCTCTAAGACAGTTGGGATAAATGGAGAGTTAATGCCTCTGGTGGTGACTGAAGCTGAGGGGAGACCTGCGGTGAATGGCAGTTATTTTTCCTCCATCAACCCAGTGGATGGAAAATGTCTACAGGAAAAATACAGTGACAGGTTTCATGACTGTGACTTTGGCCTCCTCGCAAACCTTTATGCATGTGAAGGCAAACCTGGAAAGCCACGTGAATTCTCTATCTGCCCTCTAAACACCAATGAGGAAGTTGATAACTGGCTCAGGTATTTTGAAGTCAGTGCACCACTGATCTTTCAAACTGTCATGGTGTCCAGAGACCCAGGTCTTGACCTGAGAGTGGAGCATACCCATGGCTTCAGTCACCATGGTGAGGGGGGCCATTACTACATAGATACCACCCCAAACACTGTGGAGTACCTGGGATACTTCCTCCCTGCTGAGCTCCTCTACCGTATTGACCGACCCACAGAGACACACAATGTTGGCCGAGATTAAACTTTTGACAGTTCTTTTTTATTGTATAAAAGCATTTAAAATGCAAATAATTCATTTAGCTTTTTGTTACTAGGACCACTTTATATTGATGAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000081_01029679_01036021.mRNA True 838 mRNA 0.45 6 1029679 1036116

Neighbor

gene id symbol gene type direction distance location
CI01000081_00852724_00870020 NA coding upstream 159648 852687 ~ 870031 (+)
CI01000081_00671457_00672354 NA coding upstream 357265 670678 ~ 672414 (+)
CI01000081_00332119_00340465 ADORA2B coding upstream 688876 331748 ~ 340803 (+)
CI01000081_00165149_00233462 SPECC1 coding upstream 796217 165149 ~ 233462 (+)
CI01000081_00104620_00133363 NA coding upstream 896111 104546 ~ 133568 (+)
CI01000081_01041108_01050606 NA coding downstream 3946 1040062 ~ 1050625 (+)
CI01000081_01057614_01058675 NA coding downstream 20184 1056300 ~ 1058868 (+)
CI01000081_01120653_01123960 NA coding downstream 84487 1120603 ~ 1124649 (+)
CI01000081_01137104_01147739 NA coding downstream 100988 1137104 ~ 1147766 (+)
CI01000081_01241322_01259737 NA coding downstream 205206 1241322 ~ 1261270 (+)
G293865 NA non-coding upstream 14141 1007950 ~ 1015538 (+)
G293803 NA non-coding upstream 313035 701075 ~ 716644 (+)
G293790 NA non-coding upstream 347312 681701 ~ 682367 (+)
G293768 NA non-coding upstream 399411 629235 ~ 630268 (+)
G293689 NA non-coding upstream 565220 464161 ~ 464459 (+)
G293933 NA non-coding downstream 123761 1159877 ~ 1172530 (+)
G293950 NA non-coding downstream 128653 1164769 ~ 1168785 (+)
G293893 NA non-coding downstream 256869 1292985 ~ 1293569 (+)
G294010 NA non-coding downstream 340648 1376764 ~ 1377215 (+)
G294054 NA non-coding downstream 399098 1435214 ~ 1435470 (+)
G293747 NA other upstream 284164 737051 ~ 745515 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031560 spata22 coding NC_007116.7 CM002889.2 62287716 ~ 62317496 (-)