XLOC_010886


Basic Information

Item Value
gene id XLOC_010886
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 36580443 ~ 36599740 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022210
TTCCGTGTTTAGTCAGCGTCGATCATCTGACGGCTTTAGTTCCTTTAAACGGAGTTTTGGAGTATTTTTTGGGAGTATTTAATCTGTTGAAGGGAGAGTTTAGGGTCCAGACATAAAGTCAACAGTGTTCTGCTGTTTAAAGCGTACAATTCTTCACATTATGGGGCAGTTTCTTGTGTTTTGGTCGACCTTCCTGCTGATGTGCGTCGCGTTCAGTTTTTCTGAATcagaatcaacaacaacacaacaaccTACAACTGCTCCACCTGTGCGCAAACctcatgGAGGACATTTCTCAAAGAGGGA

Function

GO:

id name namespace
GO:0005765 lysosomal membrane cellular_component
GO:0098852 lytic vacuole membrane cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022210 True 306 lncRNA 0.43 2 36580443 36599740

Neighbor

gene id symbol gene type direction distance location
XLOC_010884 NA coding downstream 9976 36507489 ~ 36570467 (-)
XLOC_010883 NA coding downstream 88603 36491517 ~ 36491840 (-)
XLOC_010882 NA coding downstream 114798 36461637 ~ 36465645 (-)
XLOC_010881 NA coding downstream 156342 36398505 ~ 36424101 (-)
XLOC_010880 capn7 coding downstream 383743 36167907 ~ 36196700 (-)
XLOC_010887 pik3r4 coding upstream 121490 36721230 ~ 36748374 (-)
XLOC_010888 calb1 coding upstream 166194 36765934 ~ 36798783 (-)
XLOC_010889 pnp4b coding upstream 208184 36807924 ~ 36834633 (-)
XLOC_010890 tdp2a coding upstream 301809 36901549 ~ 36905789 (-)
XLOC_010891 aldh5a1 coding upstream 334443 36934183 ~ 36945900 (-)
XLOC_010626 CR392024.2 misc downstream 15685268 20895112 ~ 20895175 (-)
XLOC_010877 NA non-coding downstream 558599 36021296 ~ 36021844 (-)
XLOC_010892 NA non-coding upstream 357010 36956750 ~ 36959179 (-)
XLOC_010894 BX248115.1 non-coding upstream 557265 37157005 ~ 37157121 (-)
XLOC_010899 NA non-coding upstream 1599173 38198913 ~ 38341804 (-)
XLOC_010901 NA non-coding upstream 1786068 38385808 ~ 38394558 (-)
XLOC_010904 CU855886.1 non-coding upstream 1962787 38562527 ~ 38562644 (-)

Expression


Co-expression Network