CI01000092_04822399_04827194


Basic Information

Item Value
gene id CI01000092_04822399_04827194
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4821906 ~ 4827194 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04822399_04827194.mRNA
CCGTGACTCTCAACTCACTGAAGTCCTCAAATCATTTAGATCAAATTTGTTGGAACAGTTTAAGTATCTGTATGAGAGAACAACACCTCACCAAAGATCTCATTCACTCCTGAATGAGATTTACACAGAGCTCTACATCACAGAGAGTGAAAGTGGAGAGATCAGTAATGAGCATGAGGTGAGACAGATTGAGACTCAATCCAGGAGAGCAGCAACAGAACAAACACCAATCAAATGCAGTGACATCTTTAAAACTTTACCTGGACAAGACAAACCCATCAGAACTGTGCTGACAAAGGGAGTCGCTGGCATTGGGAAAACAGTCTCTGTGCAGAAGTTCATTGTGGACTGGGCTGAAGGGAAAGAGAATCAGGACATCCAGCTCATATTTCCACTTCCTTTCAGAGGGCTCAACTTGATGAAGGACGAAACAGTCAGTCTTTCAGATCTTCTTCATTTCTTTTTCCCCATAATAAACAAAATGAAACCATTCAGTGGTGAATATAAAATTTTCTTCATCTTTGATGGTCTGGATGAGTGTCGTCTGTCTCTGGATATTCAGAGCAATGTGAGGTTGTGTGATGTGACTGAATCAGCCTCAGTGGACATGCTACTGATGAACCTCATTGCGGGGAATCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCTGATCTCATCCCCTCTGAGTGTGTTCATCGAGTGACAGAGGTACGAGGCTTCAGTGACCCACAGAAGGATGAATACTTCAGGAAGAGAATCAGTGATCAGAGTCTGGCTGAGAGGATCATCTCACACCTGAAGTCATCAAGGAGCCTCCACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCACTGTTCTAGAGAAGATGTTGAGTGAAGCAGAGAGTGGAGAGATTCCCAAGACTCTCACAGGAATGTACACACACTTCCTTATCCTTCAGACCAACATCAGACATCATGAGAAAGACTATGAGAAGAACGTGACAGATGAAGACATGATCCTCAAACTGGGGAAAGTGGCTTTTCAGCAGCTTGTGAAAGGAAACCTGATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGTGACAGAAGCATTAGTGTACTCAGGATTGTGCACTCAGATCTTCAGAGAGGAGTTTGGCTTGTATCAGGGGAAAGTCTTCAGCTTCGTTCATCTAAGCATTCAGGAACATCTAGCGGCTCTATATAAGCACCTCACTTTTACAGAAAGCAGCATAAATGTGTTTGACCAAATCACCAAACAAAGACCAAAAAAAGCTTTGGATTGGTTCCAGAATGCTGCAGAAAAATATGTTTCATTGTCTGATTTGCATCAGAGAGCTGTGGATGGGGCTCTACAGAGTAAAAATGGACATCTGGATCTTTTTCTGCGTTTCCTTCTGGGTCTGTCAGTAAAGGCTAATCAGAATCTCCTACAAAGTCTAACTACACAGACAGTAAGCAGCTCTGACAGCAATGAGAAAACAGTTGAGTACATCAAGAAAAAGATCAGGTCCATCAAATCTCCAGAGAAATCCATCAATCTGTTCCACTGTCTGAATGAACTGGGTGACTATTCATTAGTGGAGGAAATGAAATATTATCTGAAATATGGAACAGTAAGGGAAACCAAACTCTCTTCATCTCAGTGCTTGAGTGATTGTGGAATCACAGCTGAAAGTTGTGCTGCTCTGGCTTCAACACTGAGTTCAAACCCCTCACACCTGAGAGAACTGGATCTATCTGACAATAATCTAGGAGACTCAGGAGTGAAGCATCTCTCTGATGTACTAAAGAATCCTCACTGTAAACTGGAGATACTGAGGATGAGGAACTGTGGTGTAACAGAGAAAGGTTGTGCTGCTCTGGCTTCAGCTCTGAGATCAAATCCCTCACACCTAAGAGATCTGGATCTGACTGATAATAACCATATAAGTGGTTCTGGAGTGAAGTGGCTCTCTGATGTAGTACAGAGTCCTAGCTGTAAACTGGAGAAACTATGGTTGATTAATTGTGGTGTCACTGATGAAAGTTGCTCTGCTTTGGCTTTAGCTCTAAAATCAACCCCCTCACACTTGAGAGATCTGAATCTGTCTAAGAATAAAATAGGAAATTTAGGGGTGAAGCTACTCTCCAATGGACTGGAGGATACTCACTGTAAACTGGAGAAATTGTGGTAAGATCATCTCTATGCTGTTAACACACCTTTGTCTCAGTAAGACATTTTCTTTTGCATTATTGTAGTTTTGGTTACATGAGTTTCCTCTAGTTATTTTAGCCAGTAAAACTCAATGAAATCCGTGATGAAGAAAATGACATATGGGTTCAATAATGATATCTTCAACTTTACAATTCTTCCACTTACTAGAGTCATGATTAATCCTTACAAGGAACCTAATAGAAATGATAATGGAACTTAATATTTAGAATCATCTGGCGGGTTTGATGAGCACATCAGTTAAACAGGAGTCCTCTCAATGCAGATCAGCAGGTTTATAATTACAGGGTAAACCTAGTATTTCAAGGTTAAAATCAACCCAAAAGAATGTTAACTTTCAGAGCAAAATCTTTTAGGTCAAAGTGCCTCCAACTTAAAACATCTTAAGAATCTTAAGAATGGGGGAGGGGGGCACAGAAAACATAGTTGCACCCCTGCCTATTCTACAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04822399_04827194.mRNA True 2702 mRNA 0.42 4 4821906 4827194

Neighbor

gene id symbol gene type direction distance location
CI01000092_04730022_04742422 NMD3 coding downstream 79017 4729890 ~ 4742889 (-)
CI01000092_04692404_04694159 OTOL1B coding downstream 126430 4691840 ~ 4695476 (-)
CI01000092_04612376_04613032 NA coding downstream 208715 4612173 ~ 4613191 (-)
CI01000092_04545522_04550438 NA coding downstream 271167 4545236 ~ 4550739 (-)
CI01000092_04484800_04489910 NEU4 coding downstream 330758 4484233 ~ 4491148 (-)
CI01000092_04838658_04840626 NA coding upstream 11014 4838208 ~ 4840626 (-)
CI01000092_04873079_04899153 SMC4 coding upstream 45657 4872851 ~ 4899153 (-)
CI01000092_04997617_05000398 NA coding upstream 170138 4997332 ~ 5000672 (-)
CI01000092_05003845_05017069 SCHIP1.S, SCHIP1 coding upstream 176610 5003804 ~ 5017408 (-)
CI01000092_05043766_05046720 NA coding upstream 216292 5043486 ~ 5046720 (-)
G306780 NA non-coding downstream 55804 4764299 ~ 4766102 (-)
G306752 NA non-coding downstream 77272 4743846 ~ 4744634 (-)
G306782 NA non-coding downstream 100084 4721585 ~ 4721822 (-)
G306777 NA non-coding downstream 109768 4711839 ~ 4712138 (-)
G306776 NA non-coding downstream 111322 4710365 ~ 4710584 (-)
G306878 NA non-coding upstream 133364 4960558 ~ 4960838 (-)
G306905 NA non-coding upstream 330943 5158137 ~ 5158842 (-)
G306679 NA other downstream 315953 4496414 ~ 4505953 (-)
G306014 NA other downstream 1142418 3677874 ~ 3679488 (-)
G305772 NA other downstream 2096962 2724594 ~ 2724944 (-)
G304459 NA other downstream 3589614 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 3724988 1086404 ~ 1097333 (-)
G306902 NA other upstream 326474 5153668 ~ 5154133 (-)

Expression


Co-expression Network