CI01000092_04981384_04996796


Basic Information

Item Value
gene id CI01000092_04981384_04996796
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4981384 ~ 4997036 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04981384_04996796.mRNA
ATGAAATGTGAAGCTTTCAGGGTTCCTAAAAAGGGTCCAGTTTTTTACACCTTGAGTGAAAGATCAAGCATAATGATGGAATATCTTGCTTTTTCAGACTCTGACACGAGATCCAGAGCAGAAAAACCTGGCGGTGAGCAGCTTCAGCCGTGCTGTGAGAAGTGCAGAGCTCTAAAGAATCCCAAATATGAGCTTGTCACCCCCAGGAAAATGTCCAGAGATCGTTTGCAGCTACAGCTGGATGCTGAGGGTGTGTATGAGTGTTCAGACACTGGGCTGGTGTTCGAGGTCACCCAGCGCGTCAAAATCACCTACTGCATTCTCTCCTGGAGCAAGTTTAGCGCCTACTTGACAGGATCATGGAAATTTGCTGGACCCATTTTTGATGTGGACTGCGATCCGTCTATTCTCAAATCCATCCAGTTCCCACACTCACTGTGTTTAGCAGCAGATAAAGACAACGAGGTGAAGTTCAGCGTGCTACATGTGAAGAACAGCCATGGTCTGATCGAGCCCTCGGCCGATCACTCCGGGAGTCACGTCAAATGGACTGTGTCTTCACTTTCACCCGTGGGTCCGATTGCTCAGACGTCTAAGTCAGCAGAGCATCATGGGGTCGTGCAGGTGTTCAAAGAGGTGGGCCATGAAAACTCCTTCTCCTTCAGAGTTTATCTGGCTGGAAACAACTGCTCTGACATCAAGGACATCAGAAGGGCCGTTCGGCGGGCAAACAACTGTAAGAACAACAAGAGGTACATACATGTAGACAAGCCACCTACGTGCATGTTAGAGGAGAACAGGAAGTACCGCCTGATCAGCGAGCCCATGGGTCACATCACACCAGAGGACATGCTCTTCACGCCTGTCATCGTGGAGGTGAAGGGATACTTCGAGGTCTTCTTTGAGGAGAGTCCTCCTTTCAAACTGTCCTTGACAGATGCCGACTCAGGACATACTGTATGGACTGCGACCATCAGAGAGGGGGACTGTGTACATCATCTAGATGAAAACCCCAGAAAACCAATGAAAGGCAGAAAGAGACACAGCAGCACATCAGAGGAAGAGCTCTGTAACAAGCCCAGTAAGAAATCTCGCGGCGTTGATGAGTCTGATTGTCCTGCGACAGCCGCAGCTCCAGGCCTGACGGACCAGCAGCTGATGCAGGTGGCCAAACGCATGGGGAAGGAGTGGAAGATCGTAGCCATCTGCTATCTGGGCCTCTGCAAACAGGATCTGGAGGAGATGGAGGCCGCGGAGGAGGATGTGACCATGCTGAAGTTCAACATGCTGGAGCGCTGGAGACGACGGCAACCTAAGGGGAAAGCGGGAATTCAGGAACTCCACAAGTGTCTGAAAGACAACGATGACGTGCCTAATGAGGTCATTGCTGTGCTGGACGGTGCAGACGTTATGGACTAATGTTGCAGGAGCGTAACACCAGCATATATCATGATATTCATGCAGAACACACACTTGAACGTATATGGTGTGGTCATATGACACCGGTTAAGAATATTTCAGCAAACAGACTCCTTAAGTTTCTCTGTCATATGAAATGTTTGTTAGTTGAATCCACACCTTTCACACCTTATGATGTACTTTCTCAGGGGAATCTCTTTATTTTGGTGAAATTACCTTGGGTGACCTTTCTTTAGGTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04981384_04996796.mRNA True 1659 mRNA 0.49 11 4981384 4997036

Neighbor

gene id symbol gene type direction distance location
CI01000092_04939414_04942110 NA coding upstream 39246 4938881 ~ 4942138 (+)
CI01000092_04904673_04935963 IFT80 coding upstream 45197 4904673 ~ 4936187 (+)
CI01000092_04869145_04870424 TRIM59 coding upstream 110791 4869145 ~ 4870593 (+)
CI01000092_04797021_04804488 KPNA4 coding upstream 176845 4797021 ~ 4804539 (+)
CI01000092_04748399_04769770 NA coding upstream 210977 4747852 ~ 4770407 (+)
CI01000092_05020449_05021191 NA coding downstream 21669 5018705 ~ 5021820 (+)
CI01000092_05026383_05029730 NA coding downstream 29035 5026071 ~ 5031196 (+)
CI01000092_05248296_05250920 NA coding downstream 250976 5248012 ~ 5250995 (+)
CI01000092_05368233_05369612 NA coding downstream 371197 5368233 ~ 5369996 (+)
G306425 NA non-coding upstream 22079 4959054 ~ 4959305 (+)
G306422 NA non-coding upstream 25602 4955570 ~ 4955782 (+)
G306420 NA non-coding upstream 28664 4952490 ~ 4952720 (+)
G306417 NA non-coding upstream 30845 4950255 ~ 4950539 (+)
G306413 NA non-coding upstream 38384 4942529 ~ 4943000 (+)
G306284 NA non-coding downstream 4419 5001455 ~ 5017052 (+)
G306486 NA non-coding downstream 130773 5127809 ~ 5128103 (+)
G306488 NA non-coding downstream 133087 5130123 ~ 5130512 (+)
G306489 NA non-coding downstream 133946 5130982 ~ 5131379 (+)
G306490 NA non-coding downstream 135252 5132288 ~ 5132514 (+)
G305596 NA other upstream 1120051 3726347 ~ 3863135 (+)
G305584 NA other upstream 1313419 3667308 ~ 3667965 (+)
G304938 NA other upstream 2663150 2317792 ~ 2318234 (+)
G303768 NA other upstream 3664861 1315443 ~ 1316523 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008911 si:dkeyp-97b10.3 coding NC_007126.7 CM002899.2 1452834 ~ 1485086 (-)