G305056


Basic Information

Item Value
gene id G305056
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2447937 ~ 2448771 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU346605
AAGGCAGAGACGTAGTTGATAAGGCAGGCAGAATAATCAGTGACAAGAAATCAGTCCAAACAGGCAACCACAGCAAAAACGATATCCAAAAGGCAAAAATCCAATAAAGCAAGCACAATGGTCAGTAACAAGAAGGCAAGAAAATAGGCAATGAGAAACACTTGGTAAGGCAGTGATAAACTGGCAATACTTCGCAAAGTAGCAGTGGAAATGCATGTCTATTTATACAGGAGAGAGACAGGAAGTAACCAATGAGCAAGAGTCCATGTTAGTATTCAGGAGAGGGCTCCCTCCGGTGGCTGGATGAATAAGTACCAGCCTCATCCATTACAGAACCCCTCCCTCTACGAACATCTCCTGGTGTTCTCCTTCTTGGTCGTGGTGCAGGACGGTTCGGGTGCTGTTGGTGGAACTCTTGGATCAGTGATGGATCCAATATGTCATTGGCGGCTACCCATGATCTATCCCTCCCAGTCCAACAAATATTGCATCTGGCCCCCCCGACGACGTGAGTCCAAGATCTCCTTGACCAAGTAAGTAGGTAATCCATCAATCTCCAGTGGAGGAGAGGGTTCAGGGTCCGTGGTTACGGGGCCAGATGCCAGGTGGACTGGTTTCAGCACGGACACATGAAAGGAGGGAGAAACACGGTAGTTAGCAGGAAGTTCCAGACGGTATGTCACAGGATTGATCTGTTTGACAATTCTGAACGGACCAACA
>TU346606
TAAAGTACTAGCCTAGGCCAGATATAGGGGCGGCCTGTGAGGGACTCGACATGGAGGCAAGATGGAATCCAAATGCTGGAAGTTTAATAAATATCAGCAAACAAATCCAGTACTAAAGGCAGAGACGTAGTTGATAAGGCAGGCAGAATAATCAGTGACAAGAAATCAGTCCAAACAGGCAACCACAGCAAAAACGATATCCAAAAGGCAAAAATCCAATAAAGCAAGCACAATGGTCAGTAACAAGAAGGCAAGAAAATAGGCAATGAGAAACACTTGGTAAGGCAGTGATAAACTGGCAATACTTCGCAAAGTAGCAGTGGAAATGCATGTCTATTTATACAGGAGAGAGACAGGAAGTAACCAATGAGCAAGAGTCCATGTTAGTATTCAGGAGAGGGCTCCCTCCGGTGGCTGGATGAATAAGTACCAGCCTCATCCATTACAGAACCCCTCCCTCTACGAACATCTCCTGGTGTTCTCCTTCTTGGTCGTGGTGCAGGACGGTTCGGGTGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346605 False 720 lncRNA 0.48 1 2447937 2448656
TU346606 True 519 lncRNA 0.45 1 2448253 2448771

Neighbor

gene id symbol gene type direction distance location
CI01000092_02423345_02438711 NA coding downstream 9217 2422989 ~ 2438720 (-)
CI01000092_02408861_02410832 NA coding downstream 36451 2408581 ~ 2411486 (-)
CI01000092_02191463_02196322 NA coding downstream 251367 2191156 ~ 2196570 (-)
CI01000092_02134927_02166170 NA coding downstream 281390 2133818 ~ 2166547 (-)
CI01000092_02072036_02082309 OR128-10 coding downstream 364157 2071728 ~ 2083780 (-)
CI01000092_02463561_02465847 NA coding upstream 14352 2463123 ~ 2466249 (-)
CI01000092_02522204_02531634 ARRB1 coding upstream 73352 2522123 ~ 2531634 (-)
CI01000092_02570666_02599836 NA coding upstream 121425 2570196 ~ 2599836 (-)
CI01000092_02602158_02608405 NA coding upstream 152915 2601686 ~ 2608405 (-)
CI01000092_02616905_02658519 WDR62 coding upstream 168047 2616818 ~ 2658874 (-)
G305053 NA non-coding downstream 6682 2441048 ~ 2441255 (-)
G305040 NA non-coding downstream 40963 2406740 ~ 2406974 (-)
G305033 NA non-coding downstream 42140 2405135 ~ 2405797 (-)
G305032 NA non-coding downstream 58582 2388063 ~ 2389355 (-)
G305025 NA non-coding downstream 129408 2318186 ~ 2318529 (-)
G305068 NA non-coding upstream 28873 2477644 ~ 2477937 (-)
G305069 NA non-coding upstream 29573 2478344 ~ 2478544 (-)
G305736 NA non-coding upstream 31168 2479939 ~ 2480165 (-)
G305737 NA non-coding upstream 40484 2489255 ~ 2489612 (-)
G305767 NA non-coding upstream 269231 2718002 ~ 2718204 (-)
G304459 NA other downstream 1215645 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 1351019 1086404 ~ 1097333 (-)
G304369 NA other downstream 1389017 1058325 ~ 1058920 (-)
G304368 NA other downstream 1392215 1055304 ~ 1055722 (-)
G305772 NA other upstream 275823 2724594 ~ 2724944 (-)
G306014 NA other upstream 1229103 3677874 ~ 3679488 (-)
G306679 NA other upstream 2047643 4496414 ~ 4505953 (-)
G306792 NA other upstream 2355624 4804395 ~ 4865973 (-)
G306902 NA other upstream 2704897 5153668 ~ 5154133 (-)

Expression


Co-expression Network