CI01000093_01189004_01193556


Basic Information

Item Value
gene id CI01000093_01189004_01193556
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 1188547 ~ 1193673 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000093_01189004_01193556.mRNA
ATATGCGGCTACTGTAACAAGGCCTTTCGGGACAGCTACCACCTCCGGCGACACGAGTCCTGTCACACGGGCATTAAGATGGTGTCACGGCCCAAGAAGACAACCACAGCGCCCACCATGGTGCCTCTCATCTCCACTGTGCCACGCGACAACAACGGCAACCCCTCTTACGTCTCCACGATGGCGGGCATCCTCACGACGGCCACCACCTCCGCGTCCACGGCCGCAGGCATCATGTCGGTCCTGCCTCAGCAGCAGCCAGCCGTGCCCAAAAAAACCCCCAAACCTGTGAAGAAGAATCATGGCTGCGAGATGTGTGGTAAGGCCTTCCGTGACGTCTACCACCTCAACCGCCACAAGCTCTCGCACTCAGATGAGAAGCCCTTCGAATGCCCCATCTGTCACCAGCGCTTCAAGAGGAAGGACCGCATGACCTACCACGTGCGCTCGCACGATGGCGGCGTGCACAAGCCGTATATCTGCTCCGTTTGTGGGAAAGGCTTCTCTCGGCCGGATCATCTTAGTTGTCATGTCAAGCACGTACACTCCACAGAACGACCCTTTAAATGCCAAGTAACGGCCTGCACGTCCGCCTTCGCCACCAAAGACCGTCTACGTTCACACATGATACGGCACGAAGGCAAGGTAACCTGTAATATCTGCGGGAAGATGCTGAGTGCCGCCTACATCACCAGCCACCTCAAGACCCACGGGCAGGCCGGCTTCACATCCCCCTGTAACAAAGCTGTGAGAGAAAAAAAGAGCCTGGAGGAATGGCGAGTATATGAAAACGACAGTCCGCAGCGGCAAGGAATCATGCAGAAGTTAGCTGGCACTTTGCGTCTCCTTCGCTCGGCTGAGAGACAAGCAGATCCAGATTGTCTAGAATTTAGTGACGGACAGAAAAAATAGTTATTGCATGGAGTGGAAGACTGACATGCTGTATGTTTGGTGATTTCACTTTTCTAGTGCCAGAAAATCCTTGCCAGTCGACTGTTTGAAGCGGAGAACGTCGCCGCTTCATTGTTAGTGTTAACGGTTTAAGGACTTTGGCAAATATTAACTGTGAGGATTTTATTTTTGTTAAGTTAGCTTGCTTATCAGTATTTCATAGTTTTATGCATTTTAATGAGTCGCGTACAACAAAAGGGACAGTGGCTTCCGTTAATGGAAGATGAGAGGGTTTTTTATTTTCGAGACAATACTCTACAAATGAGGAAAACTAAAATTTAGAATACGTTTTTAAAAGGCCTCCTTTCATTGTAAGCCTTTTAATCTGTAGCTGTGTTTTTATTTTTATTATAATTATTATAATTATTATTCTTTATAGGTAATCTTTGGAGTTGGTCATTCCTGATTTTAGAATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000093_01189004_01193556.mRNA True 1369 mRNA 0.48 4 1188547 1193673

Neighbor

gene id symbol gene type direction distance location
CI01000093_01155146_01166220 CUEDC1B coding downstream 22327 1154778 ~ 1166220 (-)
CI01000093_01136960_01147480 NA coding downstream 41067 1136960 ~ 1147480 (-)
CI01000093_01082814_01125194 NA coding downstream 63011 1081538 ~ 1125536 (-)
CI01000093_01042275_01068202 NA coding downstream 120345 1041650 ~ 1068202 (-)
CI01000093_01024056_01030224 NA coding downstream 158209 1022996 ~ 1030338 (-)
CI01000093_01208954_01210829 RAB1A, BRAFLDRAFT_276199 coding upstream 15264 1208937 ~ 1210829 (-)
CI01000093_01231795_01232733 OR118-1 coding upstream 37618 1231291 ~ 1234697 (-)
CI01000093_01239224_01240165 OR118-3 coding upstream 45530 1239203 ~ 1240593 (-)
CI01000093_01249925_01250866 OR118-3 coding upstream 56231 1249904 ~ 1251767 (-)
CI01000093_01262248_01263186 OR118-1 coding upstream 68112 1261785 ~ 1263352 (-)
G307757 NA non-coding downstream 59442 1128878 ~ 1129105 (-)
G307753 NA non-coding downstream 118095 1068966 ~ 1070452 (-)
G307536 NA non-coding downstream 125126 990661 ~ 1063421 (-)
G307738 NA non-coding downstream 290180 897958 ~ 898367 (-)
G307554 NA non-coding downstream 353885 823658 ~ 834662 (-)
G307563 NA non-coding upstream 10702 1204375 ~ 1204759 (-)
G307804 NA non-coding upstream 85321 1278994 ~ 1279260 (-)
G307820 NA non-coding upstream 132916 1326589 ~ 1326937 (-)
G307823 NA non-coding upstream 134087 1327760 ~ 1327968 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009340 vezf1b coding NC_007126.7 CM002899.2 31244025 ~ 31265375 (-)