CI01000098_02437817_02445376


Basic Information

Item Value
gene id CI01000098_02437817_02445376
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2437817 ~ 2445376 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_02437817_02445376.mRNA
GAAGCCTGCACCAATTTCAAATCCATAAGAGCAAAGTTCCAGGAAGAGCTCCAGGTGAGGTACAGACCTGTGGTTCCTGAGAAACCCAAACGCCTCCCAACAGCTGCCATAGGCCGCTCTGGTCTGATAACCATGAGCTCTTATTCAGCTGTGGAAACCAAGACGCCTAGTCTACCCCGGGTCATTTTCAGAGAAGACCTGAAAATACCCTTAGGAAAACGCCCTGTATCATTCCCAAGCTTTCCTAACACAACATCTGAAGTTAGCAGTTCTGTTGATGGGCACAATAGGCAGTCACTTAAAGTCCGGAATTCACCCCTCATGTTGCCGTTTTCAAATGAACCAAAGCATGATTCTACTGTAATTTCTTCAAAGGGAATTACGTCACCTCTTAAATGCATCAAGAAACCAATCCCTACACCTTTCAGCTTGACCAAAGTTCCATTGTGTGGCAAAGAAATTGATAAAAATGGTCTGGGGCATTTAAAAAACAGCAGTACTCTTAATGTTCAGCTAGAAGAGTCCACCTTAAAGACTGCAAACACAGAAGCTGTAGAGGTCCACCAGACTATGCTGTCAAACCCTGGATTGCCATATTCCAGTCAAGAGTATTCTTCTACACCTTCACCAAGTGAGTCATTGACAGATTCATCTCCTGGTAGTGTTAGCCAATTCTTTGACCAGCATGTCCTGAGCACGCTAGAGAAAGCCAAGAGGAAGCTCTCCCACAAGAACCTGTTGGTGTGTGGCAGACCAAAGAGCTTCTACTCTAGTAAAGTACTAGTGCTTCCCACAGCAAGTCCTCCATCTCCTGCTGAATCTGAGAGTTGCCATCCAGAGACTTCTCCATTGAAGATCAGTGGAACATCACACACTACTGTCACTGTAATGGAGCTTAGTGGAGTCATGCAGCCTGAAAGGCTACGCAAACCTCTTCCTGATCTGACATCCCTCAGGCCAATGCCCTTAAAGCCACCTAGACCTCCACATGTGGATCTTGGCAAATATAAGACTGGAATTCACGTCAGTGACCCAAAGTGTGTACCAGAGCCTGAGATTCTGACCACTGGTAATGCATCACTTGAGGACCCAACTGTACCTCCCCCTGAATTTCCAGATTTTGACGTCTCTGCACCAGAAGCCACAGACCGTAATGGCATAAATCTGGCAGCCCTGGAATTAGAGGCAACAGAATTTCCTGATTCCTTGCCTCCACCACCACTGCCAAATGAAGGCAATGGCTTGGATTTACAGGCTCTGTTGGTCACATGTTGTCCAAATAATATTGGTGCACAGAACATGCAGTCAGGAGACGTTCCCTGTCAGTCTTCAGACGAAGCGAGGAATGTAGGGATCTTGGCATCTGCTACAGATTTGGCAATCTCTGACCTCAGAATGAATGGATCACACGCTGCCTTCAACTTGAACAGTGAACACCAACTTCCATCAGAACCAATTTCTTCTCAGCAAAGGCGTTTCCACGAAACCTTTGACAATGTTTATGAGGATGTGGAGACCGTTCCCAAATTTTCTTTTGCTCAAAGCTCGTTTAAGTGTAAAGCAGCTCCTAAAAATCCATATGCTGATAACGGCCATGTGATCACTGGACTGGAAGAGCCCATGTATCGCGCTAGAGTGCTGGCAGCCAGCAAACTTCGCAAATACGACCTGCCCGTCAAAAGTGGGGATCTCATCAGCATCATCCGAACGGTCAACTGCCCCAAGGGCAAATGGCTGGCCAGAGATGCCAACAACAAATATGGCTACATATCCGTGATGAATGTGGAGTTGAACATTAAGGAGATGCTTGAGCTTGGAAAAAAGGCGTCGCAGGCTGCCGGACGGGGACAAACTGATGGAGATAACCTTAGTTTCAGTAGCAGGTCATCTCATCAGAATCCAGTGCTTACAAGTAGCT

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_02437817_02445376.mRNA True 1918 mRNA 0.47 8 2437817 2445376

Neighbor

gene id symbol gene type direction distance location
CI01000098_02419158_02430232 GPAA1 coding downstream 6740 2419001 ~ 2431077 (-)
CI01000098_02405598_02411336 NA coding downstream 26481 2404653 ~ 2411336 (-)
CI01000098_02323797_02348141 NA coding downstream 89676 2323477 ~ 2348141 (-)
CI01000098_02293810_02295494 NA coding downstream 141966 2293346 ~ 2295851 (-)
CI01000098_02289414_02291955 NA coding downstream 145385 2289031 ~ 2292432 (-)
CI01000098_02473023_02489273 C8B coding upstream 27562 2472938 ~ 2489273 (-)
CI01000098_02499574_02514594 DAB1, DAB1B coding upstream 54198 2499574 ~ 2514594 (-)
CI01000098_02570727_02576978 PRKACB coding upstream 123658 2569034 ~ 2576978 (-)
CI01000098_02590918_02600564 NA coding upstream 144878 2590254 ~ 2600802 (-)
CI01000098_02609412_02690089 NA coding upstream 163244 2608620 ~ 2690089 (-)
G314942 NA non-coding downstream 93103 2340119 ~ 2344714 (-)
G314935 NA non-coding downstream 124319 2313227 ~ 2313498 (-)
G314874 NA non-coding downstream 169240 2207067 ~ 2268577 (-)
G314975 NA non-coding upstream 12248 2457624 ~ 2458098 (-)
G315037 NA non-coding upstream 101588 2546964 ~ 2547163 (-)
G315045 NA non-coding upstream 156749 2602125 ~ 2602341 (-)
G315068 NA non-coding upstream 360374 2805750 ~ 2805959 (-)
G314830 NA other downstream 337000 2063338 ~ 2100817 (-)
CI01000098_00525874_00530211 NA other downstream 1909262 525701 ~ 530266 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016072 si:ch211-188c16.1 coding NC_007113.7 CM002886.2 1470070 ~ 1486023 (-)