CI01000098_02827735_02831191


Basic Information

Item Value
gene id CI01000098_02827735_02831191
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2827578 ~ 2831736 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_02827735_02831191.mRNA
GTATATATTACGATTCCATAATCATGTCATTAATAATTATCTTATTTTAGGTAGCTCAGCTCAGACTGAGCGGTATAACCTGCCCCGCCGCTGTCTGCGTCATTTCTTTGCGGTGAGAAAGTGCTTTGTGTTCCCTCGGCCGGCTAGTACACAAAACATGAGAAGAATGGAGGAACTGGAAGAGAACGATCTGGATCCAGAGTTCCTTGAGCAGGCAAAATCTTTTTGCCGTTACATTTACGACAATGCAGAGCCAAAAATCATCAGCGGAGGCCGTATTATTACTGGAACAGCCCTGGGGAATCTTGCTGAGGTTTACATAGAGGCGATCCGCAGCGGGAAGGTTCCATGTCTGGAGAACGCAGTCGTGTCTCTGGCTAAGATCCAGAATGTCCGTGCAGTGGAACAGGCTCTGGAGTTCTACATGACCGAGATGCTCAGCATGGCTCAGCTTCCTATGGACCCTGAAGATCTGTCCAACATCCACACAGTCGCAGAAAAGAAGGCCACTGAAGTTTTCATCACCATGTCCTTCAATGACAATGACCAGATCTACCAACAAGAGCTCATGGGGAAGATTCATAATGAATATCAAGACATGTGCCAGCAGAATCATGAAGCGTCTCTCATGCAGTGTGAGGAGGTTTTGCGTGAGGTGTTCGATACACTGGAAAAAGGCATTTCTGATGGATTATACCTGAAAACTGGAGGATACCGACAGTACAGAGACATGCTCAGACAGCTGGCTGAGGAGTACAGAGCAAGAACACAGTCACAAATAATGTGCGAGGAAGTGTTGAGTATGTATTTGAAAGCAAAGGAAGATGTTGGAAATATGATTCTACAAGCTGACCAATCTCTCAGTGCGGCGGAACAGGAAAAAGAGGTGCAGAGATTAAAGAATGAAATCCTAGAGCAGCGACAAAGAGGCCTAGAGGAACAGAACCGGTTACAGGAGCAGGCCTTTCAAGACATGCAGAGAACCCATGATGAGCATGTGAATCAGATCATTCATCAGATGGAGAGAGAGCACGAGAGAATGAGGAGAGACAATGAACGAGTCCTGGAAGCCAAACTGAGGGAGAAGGAAACTCTTCTACAGCAGGGCTTCCAGAAGGAGGCTGCCCGGATGCAGAGCGAGATTGACAGCCTGAAAACAGACATGAATAAACAGGAGACGTCCCAACCCTCCACAACGAGCAAGGTTATGGATATAGTCGGCACTGCGGCAAGTTTGTTCTTGCCAGGCTTTGTCCCAAAAGTAGCTGGTTTTGGTCTGTCCTTGCTCTCAAAACGGTTTTGAAAATGGATTTACATTATTCACACACACTCACCTAGACATAGGCTATATATATATTATTCTCCATCACAGTTTGAATTGTCCAGCAGCTACTTTTCATTGCTTGTGAAATTGAGTTGCTGTTCTGTTGTGATGCCATTCGTGTTTAAAGGCCAGCTTATTAACTGCCAAGTTTGCACCAACATTTGTTATGAACTATAAACAAAGCTGTGCTATCAGAGAGATGGAAAACTTTTCCATGTAATTTCAAACTGATTCACGTAATCTGTGAATCCTGACGTAAATCTTCCTGGGAACCTTCCAACTTGTAGGCCGATATTTGACCATATTGAGATTATGATTATTTTTGCCCAGTTGGCAGATTAACAAGTCTTGTCTGTGGACAATAGAATGGTACTTTGTGTTTAAAGTTTTAGTTAACAGACCAAATATTCTTAAACAGACTTATAGTGTATTCACTTTTTTTGTTTTTTGTTTGCTTGTAATCAGACAGAAAAACTGTTTATTTCAGCCTATCTCTATAGGCTGAAAGTGGTCTGTGAAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_02827735_02831191.mRNA True 1848 mRNA 0.43 6 2827578 2831736

Neighbor

gene id symbol gene type direction distance location
CI01000098_02744193_02749466 NA coding upstream 78058 2743925 ~ 2749520 (+)
CI01000098_02695754_02697751 NA coding upstream 127972 2694628 ~ 2699606 (+)
CI01000098_02542022_02543246 NA coding upstream 284033 2539987 ~ 2543545 (+)
CI01000098_02447543_02468822 C8A coding upstream 358591 2447543 ~ 2468987 (+)
CI01000098_02304073_02309499 RPE65, RPE65A coding upstream 518005 2303055 ~ 2309573 (+)
CI01000098_02847366_02849020 NA coding downstream 14352 2846088 ~ 2849262 (+)
CI01000098_02860764_02879868 GBP2, GBP1, GBP6 coding downstream 27594 2859330 ~ 2880321 (+)
CI01000098_02894734_02906267 NA coding downstream 62998 2894734 ~ 2906267 (+)
CI01000098_02926357_02931996 VCPIP1 coding downstream 94048 2925784 ~ 2933179 (+)
CI01000098_02954825_02955241 NA coding downstream 121883 2953619 ~ 2955256 (+)
G314543 NA non-coding upstream 8138 2819170 ~ 2819440 (+)
G314512 NA non-coding upstream 19131 2807452 ~ 2808447 (+)
G314507 NA non-coding upstream 36105 2777177 ~ 2791473 (+)
G314510 NA non-coding upstream 56218 2714038 ~ 2771360 (+)
G314466 NA non-coding upstream 188080 2634502 ~ 2639498 (+)
G314509 NA non-coding downstream 336 2832072 ~ 2887946 (+)
G314517 NA non-coding downstream 7706 2839442 ~ 2891040 (+)
G314591 NA non-coding downstream 112907 2944643 ~ 2945283 (+)
G314580 NA non-coding downstream 166397 2998133 ~ 3044684 (+)
G314573 NA non-coding downstream 213615 3045351 ~ 3047076 (+)
CI01000098_02167217_02267829 NA other upstream 564333 2167217 ~ 2267829 (+)
G314278 NA other upstream 592747 2229324 ~ 2234831 (+)
G314121 NA other upstream 1066606 1755140 ~ 1760972 (+)
G313412 NA other upstream 1961631 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 2552321 274731 ~ 275712 (+)
G314652 NA other downstream 369784 3201520 ~ 3204360 (+)

Expression


Co-expression Network