CI01000098_02954825_02955241


Basic Information

Item Value
gene id CI01000098_02954825_02955241
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2953619 ~ 2955256 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_02954825_02955241.mRNA
ATATATAAACCCCAGGCAGCGATGCTCGCGCTGCACCCACAGCAGACTCTCACAAACATCCGGAGAGCACCTGAGGTGAGCATGAACTCAATGCCTTTTATGCAGTGACATAAATGATAACTTTAGCTATTCTAATTAGTGTATGTGCTACTTAAGAATATTTTTATTTAATTGACAAATGATTGTTTTAAAATAATGGAATCGAATCAGCGCGAAGTTTCTTAGGGGTCCAAAAGTCTTAGGCCACATTAAAAATCTGATATTTATTTTTTGTTTGTTTCAAAGCCAGAAGTAAACAAATGTATGCTATAGAATTGTGAAGGAAAAATGTCATGACGTAAAACTACACCGCAAAAACAATAGCCTATACATTAAAAAAAAAAAAAAAAATTACAGTATAGCTTCAAAAGGTCAGATGTTCTTCCACTGAAGCTCAAAATAGGCTATGCTCTTTGGAATATTCTCAAATCAATAAGGTCTTATTTGTTAACATTGTTATGTTACTTAATACATTAACTAATGAGCAATACATTTGTTACAGTATTTATTCATCTTTGTTAATGTTAGATAATTAAAAAAAAAGCTGTCATTCATTGTTGGCTCATGCTACAATGGTTTACAGTGCATTAATGTTAACAAATACAATTTTTGTTTTTAATATTGTATTAGTAGCCTAAATGTTGAAATTAACATTAACTAAGATTAATAAATGCTGTATAAGTATTGTTCTTTAGTTCATCTAAAGTAGTTAATGTTAACTATAATGTTAACTATAATGAAACCTTGTTGTAAAGTTACCAAACATGCATTATCAGTGCTGCTGTAAATAGCAAATTCCTTAAACTTTTAACTAATTTGTAAGGAAAAGCTTTGTATTAAATAAGAAAAATGTGGAAAAATAAGAATTTTCACTAAGTCTATACCTTAGGAATACTTTAGGATCCTATATATGGGTATGCATTAGCCTAATTTAATTATTTAATTAAAGTACTAAATTTCTATTAATTTGACTGGGGTGGCCTATTGGCATTAGCGATATATATAAGAAGAATAGTTTGTCATGCATAGGGCATACATTAAAGAAATATCATGCCGTCTCAACCAAGTCCTGGAAACGTTTTTATCGCCTATTGTACTACTGCCTACTGTATATTGTACTCGCCAACTTTATATTACGTTTATTCAGATTCCAGGGAATTTCCCTCAATGAAGCTGCACGTGCTACTCGCTGCGGTGACTCTCGGTGTCCACGTCTCGTTGTCTGAGTCCGCTCCAGGACACACAGACACTCAGCTGCCTTTTCTGATGCGTTTAGGAGAGGAGTACTTCTTCAGGATGGACAACACCGCTCACAGCCCGCGCGCGCCCGAACGGAGATCCCCGTCACGCACCGAGGCACTTCAGCTGCAGCTCACGCAGCGGCTCTTAGGAGGCAAGGTCGGTAGTGTCGGTAACGGGATCATGAACAGCTTCGTGGAACGCGAGCGCCGGTCTGAGGACCCGCCAATCTCGCTGGATCTGACTTTTCACCTGTTGCGCGAGGTGCTGCAGATGGCGCGAGCCGAACAACTGGCCCAGCGCGCGAGCAACAACCGCAAAATTATGGACGATTTAGGAAAATAAATAATGAATTACACA

Function

NR:

description
corticotropin releasing factor isoform 2 precursor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_02954825_02955241.mRNA True 1638 mRNA 0.38 1 2953619 2955256

Neighbor

gene id symbol gene type direction distance location
CI01000098_02926357_02931996 VCPIP1 coding upstream 20440 2925784 ~ 2933179 (+)
CI01000098_02894734_02906267 NA coding upstream 47352 2894734 ~ 2906267 (+)
CI01000098_02860764_02879868 GBP2, GBP1, GBP6 coding upstream 73298 2859330 ~ 2880321 (+)
CI01000098_02847366_02849020 NA coding upstream 104357 2846088 ~ 2849262 (+)
CI01000098_02827735_02831191 NA coding upstream 121883 2827578 ~ 2831736 (+)
CI01000098_02974320_02985981 CYP7B1 coding downstream 19064 2974320 ~ 2986478 (+)
CI01000098_03010723_03015772 TMEFF1A coding downstream 54844 3010100 ~ 3015803 (+)
CI01000098_03019871_03023524 MURCA, MURC coding downstream 64212 3019468 ~ 3023752 (+)
CI01000098_03024684_03032440 IFT57 coding downstream 69428 3024684 ~ 3032536 (+)
CI01000098_03036339_03037749 TMEM71 coding downstream 81083 3036339 ~ 3037783 (+)
G314591 NA non-coding upstream 8336 2944643 ~ 2945283 (+)
G314517 NA non-coding upstream 62579 2839442 ~ 2891040 (+)
G314509 NA non-coding upstream 65673 2832072 ~ 2887946 (+)
G314543 NA non-coding upstream 134179 2819170 ~ 2819440 (+)
G314512 NA non-coding upstream 145172 2807452 ~ 2808447 (+)
G314580 NA non-coding downstream 42877 2998133 ~ 3044684 (+)
G314573 NA non-coding downstream 90095 3045351 ~ 3047076 (+)
G314579 NA non-coding downstream 117776 3073032 ~ 3074159 (+)
G314564 NA non-coding downstream 124141 3079397 ~ 3088585 (+)
G314642 NA non-coding downstream 230314 3185570 ~ 3193346 (+)
CI01000098_02167217_02267829 NA other upstream 690374 2167217 ~ 2267829 (+)
G314278 NA other upstream 718788 2229324 ~ 2234831 (+)
G314121 NA other upstream 1192647 1755140 ~ 1760972 (+)
G313412 NA other upstream 2087672 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 2678362 274731 ~ 275712 (+)
G314652 NA other downstream 246264 3201520 ~ 3204360 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location