CI01000098_03019871_03023524 (MURCA, MURC)


Basic Information

Item Value
gene id CI01000098_03019871_03023524
gene name MURCA, MURC
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 3019468 ~ 3023752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_03019871_03023524.mRNA
TTATAAAAGTAAGTCCACCTCACCACACAAACACACATTTGCGCTCTAGATCAATGCCACTGTCATTTTAGATATTTCAGAGCTGAGAAAGCAACACATATTATGCATACCACAAGCCACTATAACACATGCACACATTAAGGGAATGTATGAATTAATGGGGCTTTCCAATGCTTCTGTGATACAGCTTCCAAAAATGTCTTAGTATCCTCTTACAGTTGTATTTATATCCATGCATTTATATCTGTGTGTGTGAACAGGGGTGGAGTTTGTCAGATTCCATTGGAGTCTCTCTTGGAGTGTCAGTTTCTCTCTGTACTGTGTGTTTGATTCAGTCTGGCCCCTTACCCATCTCTGGCCCAGTAGCATTACTTTCAGGAACGTGTGAAAAGGAGAATTGGAGATGGAAAAGAGAGGAGATGTCATGTTGGGGGTCGAGGATGAATCCGGGCAGCCCGTCTCGGCCCTGTCGATTCTCTCTCTGCTGGAACGCGTGTCTACGATCATCGATGGCGTCCAGGCTAGTCAGCAGCGCATGGAGGAACGACAGCAGCAGCTCGAAAGCTCTGTGAGTGCCGTCCAATCTGAGCTTGTCAAACTAGCTCGTGACCATGGCGCCACAGCGACGACCGTTGACAAACTGCTGCAGAAAGCCCGTCGCGTGAGCACGCACGTTAAAGAAGTACGTTCACGTGTGGAGAAACAGAATGTGCGTGTGAAGAAGGTGGAAACTACACAGGATGAGCTGCTCACACGCAACAAGTTCAGGGTTGTTATCTACCAGGGTGAAACTGAAGTTCCCTCTGTTGCTGTTACCAAGACTCCCAAGGGGGCAGGGCTTGCTAACTTGGAGGTAGAGCCAGATGAGTATGACATCCCTGCTGACCTATCATCTGATGAAGAGTACATGGTGGTAGAGGAGGCGGAGTCATCCCGGGGCGCACGTCTGAAACAGAGCGGGTTAAAAGGCATTGAGAACATCAAAGCTGCGTTCTCCAAAGAGAACATGAGCAAGACCCGCGATAAGACACGGGAAAACCTCAGTAAGACCAAGGAGAGCCTGAATAAGACGGGCCAAACTCTCGGAACCAAATTCAACACCTTTGGTGAGAAGATCGTGCCCCCCGAGCAGCGAGAGAAGATACGTCAGAGCAGTGAGAGGCTGAAGGAAAACATTGCTAAGAAAGCACCCACTAAAGAATCATTCAAAATCAAACTGAAGAAGGAACGCACTGTCGCTGAGGGCCAGGAGGGTGCAGAGCCGGAGCCAGCTGTGACTCCTCCCAAAGGCAGGAAGTCCAGCCCAGATGTAACATACACAGAGGTGGTTACCGAGAACAAGAGGGAGGGTCCAGTATCAGAAGAGGGGGCGACGCGTATTCAAGAGGATTGAAAAAAGCAACACCACTGAAACTGTGGAGAAATGGATGGAAAAAAATGTATAAAATGCAGAGAAAGAGGTTACTGAGTAAGTGGAAGAAAGGGGGAATTTTTCATAAAACGTGCTCCGAAATGTGAGAGTGTATATGAGTATGTGTGTTGGGTAGCCAAATTAATTAAGAGTGCAAACACTAGACGTGTTTGTGTCATTTCTGATACCATAAGCCACATGTGAAATGTA

Function

symbol description
murc UDP-N-acetylmuramate--alanine ligase

NR:

description
Zgc:158664 protein, partial

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_03019871_03023524.mRNA True 1621 mRNA 0.48 2 3019468 3023752

Neighbor

gene id symbol gene type direction distance location
CI01000098_03010723_03015772 TMEFF1A coding upstream 3665 3010100 ~ 3015803 (+)
CI01000098_02974320_02985981 CYP7B1 coding upstream 32990 2974320 ~ 2986478 (+)
CI01000098_02954825_02955241 NA coding upstream 64212 2953619 ~ 2955256 (+)
CI01000098_02926357_02931996 VCPIP1 coding upstream 86289 2925784 ~ 2933179 (+)
CI01000098_02894734_02906267 NA coding upstream 113201 2894734 ~ 2906267 (+)
CI01000098_03024684_03032440 IFT57 coding downstream 932 3024684 ~ 3032536 (+)
CI01000098_03036339_03037749 TMEM71 coding downstream 12587 3036339 ~ 3037783 (+)
G314591 NA non-coding upstream 74185 2944643 ~ 2945283 (+)
G314517 NA non-coding upstream 128428 2839442 ~ 2891040 (+)
G314509 NA non-coding upstream 131522 2832072 ~ 2887946 (+)
G314543 NA non-coding upstream 200028 2819170 ~ 2819440 (+)
G314512 NA non-coding upstream 211021 2807452 ~ 2808447 (+)
G314573 NA non-coding downstream 21599 3045351 ~ 3047076 (+)
G314579 NA non-coding downstream 49280 3073032 ~ 3074159 (+)
G314564 NA non-coding downstream 55645 3079397 ~ 3088585 (+)
G314642 NA non-coding downstream 161818 3185570 ~ 3193346 (+)
CI01000098_02167217_02267829 NA other upstream 756223 2167217 ~ 2267829 (+)
G314278 NA other upstream 784637 2229324 ~ 2234831 (+)
G314121 NA other upstream 1258496 1755140 ~ 1760972 (+)
G313412 NA other upstream 2153521 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 2744211 274731 ~ 275712 (+)
G314652 NA other downstream 177768 3201520 ~ 3204360 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015788 cavin4a coding NC_007113.7 CM002886.2 42191592 ~ 42198600 (+)