CI01000098_02832999_02842305


Basic Information

Item Value
gene id CI01000098_02832999_02842305
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2832527 ~ 2842547 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_02832999_02842305.mRNA
AAAAAGAACAGGTCTCTGGTGTATGAATGACAATGACTTGCCAGTGAGCATTTCATGCTATTTTTGTAGAGATAAAAATGAGTTTTTTAATGGCTAACACAATGTAAATGGTACAATATATTTTGAGAGTCCATGAATTTGTTTTGAGGTATGTTGTGTCTGCAGGTTTTTACACATTGTTTACTGCAAACAAATGATTATTTTTCCCCTTTAGCAAACAGGAATAGCTAGAGAGAGCCAGCATGTCTAATTCCAGACTAACGCCTTCACCCATTTGTTTGGTGGAGAATGTGAACGGATCGCTCTGCGTCTGTAAGGATGCCACTGAGTTCCTGAGTAGGATCAAGGAGCCGGTGGTTGTAGTGTCTGTGGTGGGACTCTACCGTACAGGGAAGTCCTACCTTATGAACCGCCTGGCAGGACAACAGTCAGGCTTTGCTCTCGGTAACACTATTGAGTCGAAAACCAAAGGCATCTGGATGTGGTGTGTCCCTCACCCCAAAAAAGCAGGACACACTCTGGTGCTGCTGGACACAGAGGGACTGGGTGATGTGGACAAGGGAGACTCTAAGAATGACAGCTGGATCTTCTGTCTGGCTGTTCTGCTCAGCAGCACTCTGGTGTACAACAGCCGCGGCACCATCGATAACAATGCAGTGGAAAATCTGCACTATGTTACTGAGCTCGCTGAGCATATCAAGATCAGATCGGCAGAAGCAGCAGAAGAGGAAGAGGAGGATTCAAAATACGTGATTTTCTTCCCATCATTCATCTGGGTCGTTAGAGATTTCACCTTGGAACTGGTAATTGATGGAAAGAAAGTGACTGAGGACGAGTACCTTGAGTTTGCCCTCCAGCTGAAGAAAGGTGTAAATAAGAAAGCCAGCGACTACAACCTGCCCCGTCAATGCATCCGAACCTATTTCCCATCCCGGAACTGTTTTGTGTTCCCATCTCCAGCCGCACCTGAAAACATGACACACTTAGAAAGTTTACAAGAACAGGACCTTGTACCAGATTTTCTGGATGTCACAGGTCGTTTTTGTGACCACATCTATCACAAGAGTTTAGTGAAAACACTGAAAGGAGGACACAAAGTTACTGGCAAATTGCTCGGGAATCTGGTGCAGATTTATGTGGATACAATCAACAGTGGGAAGGTGCCCTGTCTGGACAATGCAGTGGTTACTCTCGCAAATCTGGAGAACCAGGCAGCTGTTCAAGAAGCTTTGAAAGTGTATCAGAGTGGGATGGAAGAGGTGAAGAACAAGTTCCCAGTAAGTGTGGATGATATTTCCTCAGAGCACCAGAAGTTCAGCAGACTGGCCACCGCCGAGTTCATGAAACGCTCCTTTAAAGATGAAAAAGGAGAATACCTAATAAAACTGATGGAAAACATAGATATATGCTATGTAGACCTGCTTAAAGAGAATGAGATGGCATCAGAGAGAAAGTGCAGAGATCTGCTGAAGAATTTATTCTCTGACATGGATAAATGGCTGCAGAATGGAGAGTACAGTCAGTCTGGAGGATATGAACTCTACTGCAGAGACAGAGACGCCATCGTTGAGCAGTACCGCAGAGAACCCAACAAAGGTGTATCGGCTGAGGCTGTGCTGAATGAGTTTCTGAATGAGCGAGGAGCTGAAGCAAACGGCATCCTCTACACAGATACAAAACTCACTGAAAACGACAGAAAGATTCAAGAGGAGAAGGAGAAGAGTGCTCTGCTGGAGCAGAAGTGTAAAGAGGAAGAGGAGAAACGCATTGAGAGTGAACGGATGAGGGTGGTAGAAAAAGAGCGGCAGGAGGACCGATTGAGGCAGATGGAGGAGAAGTTCAAACAGGAGATGGATCAGCAGCAGCAGGAGATGGACAGAGCCATTGAGAGCAAACTGAAGGAGCGGGAGGAGCTGCTAAACAAAGGCTTTAGGGAGAAAGCTGATCTTCTGAATGAAGAGATTAAGAACCTTAAAAGAGAAAAGGAAGAGAAAGCGGAAAGTTCTGGCAGTTTTATGGAGAAATATGTAATACCTGTTGCCAAAGTTGTGGCAGATGTCCTTCCTTCTATCCTTCAATACAAGGTGCTAATGAAAGGACTAAAAAAATATTAAATACCACTTCAATGCAAATCACTGTTGAATTACAAATTGATTTGTTTATAGCTATAGCTTATAAATCTCAATCACGTGTAGGTTTTATTTAGTAAGATTATATTTAGTTATTATTGAGTAAAGTCCTAATTCACATTCTTACAGTGTACTGTGCACAGAAAATATGTACTGTGCTGCTGCTGATGATGGGAAAAGCATGTAGTAAGACATTAAAGTTTGTCTGTATTTAGTAGACCTTCATTTCACTCAGTTTGTGTTTGGATATAACCATTGCATTCTTCAAACAATCTGTTACAATCATTAAATGCATCAGATTAAAATTCATTATTATTGAACTTGTATGTTCATAAATCTTGAAGCTGTTGTCATCACAAATCCTTTTCCCATTTCCCAATTTGACTCCCGACCTCAGCTTTAGAAGCTGATGTAAACAACTTCTTTTTATTTTATTATGAGCAAGGTTCATAATAAA

Function

NR:

description
Interferon-induced guanylate-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_02832999_02842305.mRNA True 2586 mRNA 0.42 10 2832527 2842547

Neighbor

gene id symbol gene type direction distance location
CI01000098_02807742_02809626 NA coding downstream 22783 2806171 ~ 2809744 (-)
CI01000098_02764782_02794031 NA coding downstream 37409 2764509 ~ 2795118 (-)
CI01000098_02609412_02690089 NA coding downstream 142438 2608620 ~ 2690089 (-)
CI01000098_02590918_02600564 NA coding downstream 231725 2590254 ~ 2600802 (-)
CI01000098_02570727_02576978 PRKACB coding downstream 255549 2569034 ~ 2576978 (-)
CI01000098_02886335_02890733 NA coding upstream 43483 2886030 ~ 2894018 (-)
CI01000098_02908248_02923690 NA coding upstream 65577 2908124 ~ 2923690 (-)
CI01000098_02938355_02941204 NA coding upstream 95689 2938236 ~ 2941314 (-)
CI01000098_02945210_02951816 ADHFE1 coding upstream 102079 2944626 ~ 2951816 (-)
CI01000098_02956318_02961605 TRIM55A coding upstream 113771 2956318 ~ 2962369 (-)
G315077 NA non-coding downstream 11632 2820664 ~ 2820895 (-)
G315075 NA non-coding downstream 12627 2819583 ~ 2819900 (-)
G315068 NA non-coding downstream 26568 2805750 ~ 2805959 (-)
G315045 NA non-coding downstream 230186 2602125 ~ 2602341 (-)
G315104 NA non-coding upstream 91939 2934486 ~ 2934695 (-)
G315008 NA non-coding upstream 173323 3015870 ~ 3022054 (-)
G315028 NA non-coding upstream 220219 3062766 ~ 3072752 (-)
G315018 NA non-coding upstream 230485 3073032 ~ 3074185 (-)
G314830 NA other downstream 731710 2063338 ~ 2100817 (-)
CI01000098_00525874_00530211 NA other downstream 2303972 525701 ~ 530266 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00015261 NA coding CM030132.1 CM030132.1 6124100 ~ 6144724 (-)