XLOC_011096 (TPPP)


Basic Information

Item Value
gene id XLOC_011096
gene name TPPP
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 52875093 ~ 52879741 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021627
TTATTTAAAGTACTGACGTAACAAATactacatttaaaatgaataaaaactatgaACAagttttaatgataaaaaaaaatcacacaaagaTGTGACAAAAGAAATTAATATGAAATTAGAAAAGATAAAAACTTATCCATCCAGTTATTTACAACTACAGCTGCAATAGTACTGCAAACAAGAggttaatataaatgaaaatgtattaaattttatttaagagttaaaaacatttacatttaaaccaAAACACTAAATCTGCCAAGATAAAATTTCCTGGAAAAGCTGTGTGAGGTTTGACATGCTCTGTTTCAGTGTCAGAGGCGATCTGCAgtgtttgtcttgtgtttacagaAGCTCTTTTAATCAGGCCTTGCATGTTTCTGCTTCACTCTGTGTTTATATTTCATGCCACAATATATACTGACGAATTTATCAGCCGCTTGTCTTGGCTTCATCTCATTGTTTTCTAGGATCAAGTCTGCCCGCACTATTACCTACAGCCAGTTCAGAGAGGCGCTGGCGGAGCTGGCCAGAAAACGCTTCAAAGAGAAGAGCAGCGAAGACGCCGCCGAGGAGGTTTACAAGATGATCGAAGGAAAATCCCCCGTCATTGCAGGAGTCACGAGAGCCGTAGCGTCCCCGACCGTCTCCCGCCTGACGGACACCAGCAAGTTCACCGGCTCCCACAAGGAGCGTTTCGACGAGACGGGCCGCGGGAAGGGGAAAGCCGGCCGCGTGGAGCAGCTGGACACATCTGGATACGTCTCTGGATACAAGCACGCAGGCTCATACGAGAAGAAAACCCAGAAGCCTCCTCAGAAACCCCTGTGAGATCCTCCAGCAGCAGCAGAAGATTTAAAGCACAAAGGGATTTTTCCTTTTTGTATTGAGGGTACGTCTGTTTATCCCCCCCTGGTGAATAACCTGTTCCTCTTCCTATAAGTGTTTTATTTCTATTAACTGGAACGCTGTTTACATCCGACGTCACCAGCTGGTACGTTCCTAACAAAACCCCCATGATGCCAAGA

Function

symbol description
tppp Enables several functions, including GTPase activity; magnesium ion binding activity; and protein homodimerization activity. Involved in several processes, including microtubule cytoskeleton organization; negative regulation of tubulin deacetylation; and positive regulation of protein polymerization. Located in several cellular components, including mitochondrion; mitotic spindle; and perinuclear region of cytoplasm. Colocalizes with microtubule and microtubule bundle.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105029

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021627 True 1031 mRNA 0.43 2 52875093 52879741

Neighbor

gene id symbol gene type direction distance location
XLOC_011095 spire1b coding downstream 54070 52786644 ~ 52821023 (-)
XLOC_011094 azin1a coding downstream 138544 52706059 ~ 52736549 (-)
XLOC_011093 NA coding downstream 186648 52684758 ~ 52688445 (-)
XLOC_011092 ubr5 coding downstream 228304 52542550 ~ 52646789 (-)
XLOC_011091 NA coding downstream 334957 52526852 ~ 52540136 (-)
XLOC_011097 zdhhc11 coding upstream 21749 52901490 ~ 52916248 (-)
XLOC_011098 brd9 coding upstream 46398 52926139 ~ 52966865 (-)
XLOC_011099 si:ch211-269k10.4 coding upstream 368090 53247831 ~ 53259409 (-)
XLOC_011100 NA coding upstream 594717 53474458 ~ 53481394 (-)
XLOC_011101 CR759845.1 coding upstream 705966 53585707 ~ 53637122 (-)
XLOC_010626 CR392024.2 misc downstream 31979918 20895112 ~ 20895175 (-)
XLOC_011089 NA non-coding downstream 927224 51897756 ~ 51947869 (-)
XLOC_011088 NA non-coding downstream 985359 51875371 ~ 51889734 (-)
XLOC_011087 CABZ01074290.1 non-coding downstream 1119587 51755392 ~ 51755506 (-)
XLOC_011102 NA non-coding upstream 760505 53640246 ~ 53649995 (-)
XLOC_011103 NA non-coding upstream 771161 53650902 ~ 53655539 (-)
XLOC_011104 NA non-coding upstream 806573 53686314 ~ 53699443 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000086_01994840_02008387 TPPP coding CI01000086 null 1994595 ~ 2008387 (-)