CI01000112_00133946_00189136


Basic Information

Item Value
gene id CI01000112_00133946_00189136
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 133946 ~ 189136 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_00133946_00189136.mRNA
GCATATGAGAGGAGGTTTCCCACTTGTCATCTTATTCCCATGTTTGTGGACAGTGATGTGATCAATGAGGAGAACAGTGAGGATGGATCCATTCATAAGATTGAGAGAAGGTGTAAACTAGACGTGGATGCACCACGACTCCTCAAACGGATTGCAGGTGTGGACTATGTCTACTTCATTCAGAAGAACTCCCTGAACCACAGTGAAAGAACTCTTCATATTGAATCCCACAATGAAACCTTCTCCAACAGAGTCATAATCCATGAACTTTGCTGTTACTCGGTTCACCCAGAAAATGAAGAATGGACGTGTTTTGAACAATCTGCCAGTCTGGACATCAAATCTTTCTTTGGTTTTGAGAGTACAGTAGAGAAGATCGCCATGAAACAGTATGCCAGCAGCATCAAAAAGGGTAAGGAGATTATTGAATACTATCTGAGGGAGCTGGAGGAAGAAGGTGTTATCTATGTACCTCGGTGGAGCCCTTGCCTACCATCACCCACAAAACCTATGGTGTCAGTTGTTCACCCTGTGTTGCCTATCACTCCCGCAATCACCATTGAAGCCCCTACTGAGAGCATGAATGAGACTCAAGTGTGTAAAGAGGGCAGCAGTCCTCCTGGCAGCCTAAATGATACCTTGGTAGCCAGTCCAGATGATAAACTGGATGCAGACTACATCAAACGTTACCTGGGTGACCTCACACCACTCCAGGAGAGCTGTCTCATTCGCCTGCGCCGCTGGTTACAGGAGACACACAAGGGCAAGATCCCAAAAGATGAGCATATTCTACGGTTCCTGCGTGCACGGGACTTCAACATAGATAAGGCAAGGGAGATCCTTTGTCAGAGTCTGACATGGAGGAAGCAGCATCAGGTGGACTACCTGCTGGATACATGGAGCTCTCCTCAGGTGTTGCACGATTACTACACCGGTGGCTGGCACCACCATGACAAGGATGGCCGGCCTCTGTATATCCTACGGCTTGGACATATGGACACTAAAGGTCTGGTTCGAGCACTTGGAGAAGAATCCCTGCTTAGACATGGGCTCAATATGAGGCATCTGTGGCGCCCTGGAGTCAAAGCTCTGCTGAGGATTATTGAGGTAGTGGAGGCCAATTACCCTGAGACTCTAGGCCGTTTGCTTATCCTCAGAGCTCCCAGAGTTTTTCCTGTCTTGTGGACACTGGTAAGCCCTTTTATTGATGAGAATACACGAAAGAAGTTTCTGATCTATGCGGGAAATGACTACCAGGGCCCTGGTGGTCTTGTGGACTACATTGATAAAGAAATCATCCCTGACTTCCTTGGAGGAGAGTGTATGTATGGTTTTAGTACCTTATTGAATTTAAGAAGTGGCACTGTGAAATATGTGCAGTGTGAAGTCCCAGAGGGTGGCTTGGTGCCTAAGTCCCTGTACAGAACTGCAGAGGAACTGGAGAATGATGAAATCAGGCTGTGGACAGAGACTATTTACCAGAGTGCCAGCATCTTTAAAGGAGCGCCACATGAGCTACTGATTGAGATCATCGATGCCTCCTCAGTCATCACTTGGGACTTTGATGTGTGTAAAGGTGATGTGATCTTCAATATCTACCACTCTAAACGAGCTCCACAGCCGCCAAGAAAAGATCCGCTGGCTACCCATGGCATCACCTCTCCTGCAGGCAACAATGTGCAGCTTATAGATAAATCCTGGCTGCTGGGACAGGACTACAGTATGGTGGAGTCACCACTCACTTGCAAAGAGGGAGAAAGTGTGCAGGTGTCCTCTCACAAGTGTAAAGTCATGTACTACACTGAGGTTCTTGGCTCAGAAGACTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_00133946_00189136.mRNA True 1829 mRNA 0.48 12 133946 189136

Neighbor

gene id symbol gene type direction distance location
CI01000112_00296142_00298776 NPTX1L, NPTX1 coding upstream 106022 295158 ~ 298848 (-)
CI01000112_00311207_00314623 NA coding upstream 120556 309692 ~ 314884 (-)
CI01000112_00696611_00697182 ANAPC11 coding upstream 507420 694121 ~ 697428 (-)
CI01000112_00792970_00793455 CQ067, CLG09H17ORF67, C9H17ORF67 coding upstream 603196 792271 ~ 793455 (-)
CI01000112_00810157_00821637 TRIM25 coding upstream 620325 808545 ~ 821932 (-)
G328044 NA non-coding downstream 117324 16112 ~ 16622 (-)
G327667 NA non-coding downstream 118933 14729 ~ 15013 (-)
G328055 NA non-coding upstream 38317 227453 ~ 237067 (-)
G328087 NA non-coding upstream 53566 242702 ~ 245105 (-)
G328089 NA non-coding upstream 56804 245940 ~ 246271 (-)
G328090 NA non-coding upstream 58164 247300 ~ 247513 (-)
G328099 NA non-coding upstream 69771 258907 ~ 259128 (-)
G328332 NA other upstream 591028 780164 ~ 781784 (-)
G328641 NA other upstream 1096956 1286092 ~ 1286524 (-)
G328642 NA other upstream 1097519 1286655 ~ 1286958 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location