G329340


Basic Information

Item Value
gene id G329340
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3275564 ~ 3275886 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU374360
GGTATCTCCCGGGTGAATACAAGTTTTTTAAAAGTAATTTATTATAGAATTTTGTTTAAACATTGCTGCTGGCTAACACTGAAGACTACAGAATAATACAAGATGTATCACTCGTATTGTTTTGAATGGGAGAAAGTGCAACGCGCAATATGGCGGAATAATTCCCGCCTTCTAAATAAGAGCCAATCGCCGACTGGTAAAGTCATCGCATCACTGCAGCGGCCGTTAGAAGCACCGGTTTCTATAGAAACAGTCAGATGTGAGCCTCCGAAATGAGGCACAGGAGACGCGCATTTAGGTCTGCGCATGCGCATTAGATCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374360 True 323 lncRNA 0.43 1 3275564 3275886

Neighbor

gene id symbol gene type direction distance location
CI01000112_03234159_03240113 MHC1ZDA, MHC1ZBA coding upstream 35451 3233045 ~ 3240113 (+)
CI01000112_03192658_03204707 MHC1ZBA coding upstream 70532 3191661 ~ 3205032 (+)
CI01000112_03112349_03117520 NA coding upstream 157977 3112349 ~ 3117587 (+)
CI01000112_03100235_03105799 USH1G, USH1GA coding upstream 169291 3099448 ~ 3106273 (+)
CI01000112_03085161_03094204 HID1 coding upstream 181158 3085161 ~ 3094406 (+)
CI01000112_03285278_03286531 STK19 coding downstream 8672 3284558 ~ 3286568 (+)
CI01000112_03344466_03359943 CYTH3, CYTH3A coding downstream 68580 3344466 ~ 3360296 (+)
CI01000112_03571702_03574425 NA coding downstream 295494 3571380 ~ 3574700 (+)
CI01000112_03608324_03621681 NA coding downstream 332438 3608324 ~ 3621688 (+)
CI01000112_03653384_03730444 NA coding downstream 377498 3653384 ~ 3730448 (+)
G329354 NA non-coding upstream 56891 3218414 ~ 3218673 (+)
G329307 NA non-coding upstream 63733 3210141 ~ 3211831 (+)
G329277 NA non-coding upstream 177268 3097920 ~ 3098296 (+)
G329276 NA non-coding upstream 202835 3067831 ~ 3072729 (+)
G329195 NA non-coding upstream 226571 3027017 ~ 3048993 (+)
G329334 NA non-coding downstream 25782 3301668 ~ 3302096 (+)
G329296 NA non-coding downstream 26293 3302179 ~ 3305395 (+)
G329339 NA non-coding downstream 30702 3306588 ~ 3306879 (+)
G329373 NA non-coding downstream 100395 3376281 ~ 3384378 (+)
G329380 NA non-coding downstream 111271 3387157 ~ 3387370 (+)
G329194 NA other upstream 343675 2920254 ~ 2931889 (+)
G329125 NA other upstream 657413 2617704 ~ 2618151 (+)
G328456 NA other upstream 2042446 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 1808834 5076817 ~ 5101845 (+)

Expression


Co-expression Network