CI01000113_00496299_00500634


Basic Information

Item Value
gene id CI01000113_00496299_00500634
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 496095 ~ 501017 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_00496299_00500634.mRNA
AGACCCACCCTTAGTTTTATCTGATCTCGAGGATGTGTTGACAATGGAGGGAAATAGGTTGAAGTACTGAGTTGTGGCTTCTCAACATTGGGCTTTTAGAATGCGATGTTGCCTTTTCTAAAAGATTAATGTGCTCATATGTTTTTTAAACAACGATTTTAAGTGACAGGATGCAAATGAATAAAGTTGCAACGTGCACTTTGAGAGAGATGTGTGGGGGAGGGTTAACATTAACCAAAACAGGCGGCTATGCGAGGGCAGACTGGGCAGTGGTTTCCTGCGATAAATGAAGGGTCCGAGCCCGTGTTTTGTGTTACCGCCTGAACAATTAAACACTGTTAGCTGGTTAACAGCAGTGTCAATATAGCGCAGCTACTTCTAAAATGACGGCGCGGAGCGATAGGATACTCTTCACGTGTCTAATTTTGGATCTGCTGTCGCGGCGGTATGCGTTGAATGGTCTTCCAGATATTTCCATCAGTGCTGGGGATCATAAAGGACCAATGACAACGGGCCAGCAGTATAAACTCCAGTGTGACGTTCTTTATGTGGCTTCTGTTCGGTATCTCACTGTCAAATGGTACAAAGGACAGACTCTGGTGGATCAAACCAACTTCACTGACACCATCAAGACTCCAGTGAATAAAACAGTCACACTCATGATCCGTCCAGACAGATCTGATGATGGAGCTCAGTACAGGTGTGAAGCAGAGCTGGAACTGGGAGCAGAAGGACCTCAACCTCCTCCTAAAGTCACATCAGATCCTCTCAACATTACTGTATATTTTAAACCGATCATCAATGAGACCAAACTGCTTTCCAAAGTGCCTGTGTTTCGTGGCTATGAAATGGTGCTGGTCTGTGAAGCCGAAGGAAACCCAAAACCAACAATCAGCTGGAATATCAGCACAAATAATCCAGTTTATAGTGAAACTTTTACTATAACAGATTCAACACCAGAAGAAGTGTCCTGCATTGCAAACAATTCTGTTGGCAGCACCATCAGACATGTAAAAGTGATTTTAAAAGAGGATTACCTGCCCCTAATAGCAGGGCTTGTTGCCATCACAGTGGCGTTCATCTCAGTCATCTTCATCTTCATCTACTCTATCTACTACAAAACAGCCAAGACGGGCCGTTATAGCCTGAAGGATGCCAAGCCTAGTGCACAAAATGGAAACATAGCACAGAATGGCAAAGACAACACTATCCCTATGAAGAAACTCTCTCAGAGCAATATCTTTGCTTAGGTATGAACCCCTGGGTTTGCTGCATCTGCCAAGATACACTATCCACATTGGGCAAGGATTGTTTTTACACTGGAAGTCTCTAGGCCTCTGTTCTGAGGCTAGTTTCTTCATGGCTTCATTGTTTTTTATTTTACGGAGCATTGGTCCATTCACTTCTCTCTTAGATCCAGTTGTCATCAACTGTTAATTGCATCGCAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_00496299_00500634.mRNA True 1454 mRNA 0.44 4 496095 501017

Neighbor

gene id symbol gene type direction distance location
CI01000113_00489480_00490623 NA coding downstream 5359 489480 ~ 490736 (-)
CI01000113_00473025_00476254 NA coding downstream 18032 472132 ~ 478063 (-)
CI01000113_00461761_00471457 MGRN1, MGRN1B coding downstream 24638 461761 ~ 471457 (-)
CI01000113_00449242_00453843 AANAT2, AANAT-2 coding downstream 42252 448924 ~ 453843 (-)
CI01000113_00355640_00360687 MPG coding downstream 135275 355276 ~ 360820 (-)
CI01000113_00503311_00504977 NA coding upstream 1652 502669 ~ 506043 (-)
CI01000113_00511782_00515713 NA coding upstream 10406 511423 ~ 515713 (-)
CI01000113_00529415_00542504 NA coding upstream 28213 529230 ~ 543020 (-)
CI01000113_00593453_00601556 EIF3G coding upstream 92365 593382 ~ 601556 (-)
CI01000113_00611039_00611881 P2RY11 coding upstream 109843 610860 ~ 611939 (-)
G332349 NA non-coding downstream 14913 480913 ~ 481182 (-)
G332347 NA non-coding downstream 42999 452755 ~ 453096 (-)
G332346 NA non-coding downstream 43747 452148 ~ 452348 (-)
G332344 NA non-coding downstream 47760 447950 ~ 448335 (-)
G332313 NA non-coding downstream 121403 374486 ~ 374692 (-)
G332170 NA non-coding upstream 72823 573840 ~ 580135 (-)
G332356 NA non-coding upstream 88996 590013 ~ 590327 (-)
G332165 NA non-coding upstream 144573 645590 ~ 648926 (-)
G332384 NA non-coding upstream 188733 689750 ~ 689988 (-)
G332389 NA non-coding upstream 204962 705979 ~ 706261 (-)
G332160 NA other downstream 49258 390227 ~ 446837 (-)
G332210 NA other downstream 446610 47990 ~ 49485 (-)
G332649 NA other upstream 1646197 2147214 ~ 2148558 (-)
G332837 NA other upstream 1749828 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 1866599 2356565 ~ 2370009 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location