CI01000113_01137145_01178626 (CAMSAP3)


Basic Information

Item Value
gene id CI01000113_01137145_01178626
gene name CAMSAP3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1136997 ~ 1178626 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01137145_01178626.mRNA
CTACTAGAAATATCGGCCTTTCGCAGTCCCAATGCTGTGGTGGTCGCGTGAAAGAAAAGGATGACTGTTTGATTTTTGTTTCATTCCTCACCGCATCGCCTTCCTGTTTTTCCCGGCCCGTCTGTTTTGGACCTGCTATGGTGGACTCGAATGCAATGAGGAAGACTTTTGTGGTCCCGGACATAAAGCCATTGGATCAGTATGACTTGAGCAGAGCCAGAATCTGCGCCAGTGTCGGGTGGCTCCTGGCGAAATCCTACGGCAATGCAGCAGACCTGCTCGACCACACCCTCTGGTCAAAGTCACACACAGCCGAGCCAGAGAGAAATCAGGCCAGATTAAAGAGGCTTGGCTGCAGTGCAGCGATGGCTGTATTTCAGCGTTCAGACATGACTCATGGGTTTTTTTCGAGTGGGTTTTTTGGCCAAAGCTTCACTCTGGATGAACTCGGCTCAATAAAAATCTATCTTTGGAGTGCTGTCCTAGATGCAAGAGCTTTGAGTTCAGAGAATGTTCCAGTGGAGCTGCGAGAGCCGTTCTACTGTGATCAGTACGAGCAAGAACACCTGAAGCCTCCCGTCACGCGCCTACTGCTGTCCCCCGAACTCTACTGTCGCACTTACGGCCTGCTGCTTGGCGGAAGCCCGGGGGCAGAGGGGCTCCCCAAAGACATTCCAGCACTCCTACAGGTCCTGGGCAGGAAGGGCTTGGCACCCAAAGAACAGAATGCCCCTGTGACAGAGGCCGAGCTCCGACAGAAGCCCATCAAAATGTTCACCAGTTCAGATCAATGGGAAATCAAAGCTGATTTGGCCTGCCAAAAGTCACAATCAATTCACCTTCTTAGACCAGCATGGGGATGGTTTCATTGCAGCACTGGGGGATGTTTTCTGGAGGTCCTAAATCTGCACATATCGACATATCGATGGGTACTACAAATTTTGTTTTCAAATATTTACAATAAGTTCCTCAGTTCTCCAACAGAGCCATCTCTGAGTGCTGACTCTTCTGAGGATGCCAAATATTGTGTGGTGCTGGAGGCAGGTGAACATTCAGCGCTCTGGGACTCCCGGTTGCAGGTCCCCTGCTGGTGTCATGATGCGCTCGAACATCTGTTCTTAAACCGACACAGCGATCGGCTGAAACCCTCCCACTGTGGCTTATCCTCACAAACATGGGCCCCCTGGCTGAGCCAGTCACTGGAAGCTGAGAGTGCCCACTTGGAGTTGATAGATGCCTTAATGGCAGTGGGTGCCATGGAGACGGTGAGCACAGTCTTGGCGAGTGGCGGATCGGAGCTGCTGGGTACAGATGCAACCTGGGACAGAGCCCTGCTTTACTGGGTGAACACGCTGAATCAAAAATTGAAGGAACAAACAGAAGGTACACAAAATGATGCATCTCAGCCTAGTACTGAACCACAGCCTGTTCAGCCTTCGATCCGGTACAGGAAGGACAGGATGCAGTCTAAGCTCAAACCTTGTTTTCCTGTGGTGAATGAAGTGAAGGATCTCTCAAACGGATGTGCCATTGCTGCTGTTATTCACCATTACTGTCCTGGTCTACTGAGATTAGAGGATATCTGTATGAAGGACTCCATGTCTGTGGCTGACAGCCTGTACAACCTACAGCTGATTCGAGAGTTCTGTGACAGCTGTTTGAAGAGCTGCTGCCCTCTAGTGTTGGAGGATTTACTCTACAGCCCAGCAAACTTAAAGACAAACATACTGAGCTTTCTGGCAGAGCTCTTGTATTGGTTTGAAGTCTCAAAGCCAGAGTTTGTTCAGCCCCTGCAGGACACACAGCTGACTGAAACCAGTAATGGCAACAGTGGGTCCAGCAACAGTGGTTCTCCCTCTATCTTCAAAAAGCCTTTCCTGCCCATCTCTTCCCCTGTGACTGCAGCAACGGGATCTCTGACTCAGTCTACCTCAATGTCTCATGTAGAGGCAGCAGGACGAACATGGTCTAAGAAACCTCTTAGCCGTCCACTGTCCTCTGCGGTGTCCTTCAGTATCCCTTTTGGTCTGGACAGTGATGTTGACATTGTGATGGGGAACCCTGTTATAACTCGATCTGTCAGCTCAGACAATCTCAACCCTACTGGTCAATCCATGGCACGTGTCCCCTACACACCTCCAGAGGACCTCAGCCACTTCCTGAGTAAGCCCACTGGGCCCAATGGCCCTCAAAGAGCTTCCTGGGCCACTCGGACTCGTCCAATGCTAGCTGAGGAGAACGGCATTGATGAGAGTGAGACAGGAGAGCTACCAACAATTGAAGAGGCACTGCAGATCATTCACAATGAAGAGAAGATGGAACCTCGTCTTCACCCTGACGGGGCACCTGATGGCTTCTTTCTGCATTCACCAGATGATCCAGCAAATGCTAGACACAATGGCAGCCCAGCGACTCTCAGCTCTTCAGCCCCATCCCGCTCAGGAATGCTCTACCACCGATCCTCAGGAGTCCCACCAGAGCCCAGCCGCACCAGACACCCCTCAGAAGGATCCAGAGATGACGACTCTGTGTTAAGAGATGGAAGCGTAGATTCAGATGCCTCGGAAGATCTTCTAAAAACCCACTCCACCCCTGCCACACCCGCTTCGGGCCCTCACATATCTCGATCGCGTGGCGAAGAGACACCTGATAGCGGTGTGAAGATGACCAATTTTGCTGAACGGAAGAAGAAACTGGTTCCAGAGCAGGTACGAACCAATGAGCCACAGGCCCCACAAATGACTTCATGGGCAAAGAAATCAGAGGAGAGTCCTAGTAAGAGTCCTGCTCTCAGCACTGAAATGTCAGAACTGGGGGCGAGGCTGGAGGAGAAACGGAAGGCCATTGAGGCTCAGAAGAAGCGTATAGAAGCCATCTTTGCCAAACACCGGCAACGGCTGGGAAAAAGTGCCTTCCTACAGTTAAAGAAGGAGCAGGAGGATGGGGATGGTGAGGAAGGACGTCAGGGGGAGGCTGGCACCTCGTCCATAGAAGATGACCTCAGCCGTTTGGCGCTGGAGGAGAAACTGGCACGCTTGGAGAGAGAGGAGCAGCAGGAGGAGCAACAGGAGGCACAGTTGAAAAAGAGGCCTTCAATAGAAGAAGAGGGAAATATCAAGCCCACTGTCCAACAGGACATTCCAATAGAGAAAGACAGATCTGGAGTAGGAATTCCTGGAGGGAAAGGCACGGCCCCACTGGGTGATTACAACAACGCTGTGTCTAAACTAAGCGCTGCTCTCAATTCTCTCCAAAATGATATGCAGCGCCTCTCGGAGCAGCAGAACCAGCTGATGAAGAAGAAGGCAGCTCCTAACAACCAGGCTTGGGTCATCCCACCCACCTCCAAACCCTCAACAACTGCACCTTCTCGTTTGTCAAGAGAGTCCAATCGTGACCTACCCTCTACCTCCTCCTCTCCTTCCCCATCTCGCAAGACGTCAAGTCAGACCGCTCCCCCGAAATCACCTGCATCCCACCGTAGGGCACAGTCTGCACCTCCAAAGAGCCCCAAACTGCCTCACCACCCTCGACCTGCAGAGCTCAAGATGCCCGTTTCCACACGAGTCTTAACTGCCCCTCAAAATGTGGACAGCATTCCTCACTTACGAAGAGTGTCTCCATGGCAATACAGGGACCAGAACTCGTCTACTTTCAACATAGGTACACCCACTCAGAGTGAGTCCCGCTCAGCTTCATCCCTGTCCAGACCAGAGGACAACTTCTCAGACACCGGTTCCAGTGAGGACCATACAATCTTCAGTATGGAACTGGAGGGTGGATCATCACAAGTTTTGCCCCATAAGGAGCGTCAGGGTGGTGGCAGCAGCTCGGGCGCTCCTTCCGAGTGCTCTTTTGAGAGTGACATTCCAGCAGCGGCTTTCAACGGCAAGCGCAGTAGCCTTATCGAGATCTCACTGTCCTCTCTCAAAGCATTAGAGGGTGAAGAGGCAGATCAGAGCCAGGATATCTTCTCAGACTCAATGAGCGACCAAACAGAGCCAGAAATGAGGGGTGGAGTTGGATTCTTCTTCAAGCAGGATGAAGCTCGACCCGAGGATGAGATGGAGAAGAGAAGAGCAGCATTACTTGAGAAACAACAAAAGAGAGCAGAAGAGATAAAGAGACGAAGACAGGAGCAAGAAAGAGAGAGGGGGGCAAGCAGCAGGTCGTCTTCAGTGGATAGGTCCCATAAAGGAGAGGAGAGACCCAAAACTCCTTCTACCCCTCCGCCTCCCCGCACCCCTCCGCCAGATGGCACTCCTCAGCGGCGTGGAGACTTCACCCGCCAGGAATATGAACGGCGACATCAGCTGAAAATAATGGAGGATCTGGATAAAGTCCTCCGTTCTAGACTAAATAAAGTTTACTCCCATTCAACAATGAATCTGTCCTCTATGGCCAATGATAATGGGACACTAACTGTCAGAAAATCTCCAAGTCGTTCTCATTCACCATCCAGACTGCTATCTCCAGGCCGTCTTGCCGCACAGAATGGGGAATGGGAAAATGCGTCTACTATTTCGTCTCCAGCCTCCATCCCAGAATACACTGGACCTAAACTCTATAAGGAGCCAAGCTTCAAGTCCAATAAGTTCATTATCCATAATGCCATCTCACGCTGTTGTTTGGCAGGAAAGGTCAACGAACCACAGAAAAACAAGATTGTAGAGGAATTAGAGAAAAGCTCTGCAAACCATTTTCTCATCCTGTTCCGGGATGCCAGCTGTCAGTTCCGAGCGGTTTATACCATGAACCCCGAGACGGAGGAGATGGTTCGGCTCACAGGTATTGGCCCGCGGATTATCAGTCCTGCTATGGTGGAGTCGATCTACAAGTACAGCTCTGACCGTAAGCAGTTCACGGTCCTCCCGTCCAAGACCATGTCCATGAGTGTGGATGCCTTCACCATTCCAGGCCACCTATGGGAGCGCAAGCGCCCAGGAACCCCAAAGAAGCTCGGGACCCCAAAATAAACCCTGCTAGAAATGCAACTATGCCTGAGCTGGCCCGGGTTTCATTTCCCGTCTCCGGCAGTGCAGCAGGGCTCATTGGAGTTCATTCCAGGAGAAAGAGTTGGATAACAAAAAAAAGAGGCCCTAATACAGAAAATCCTAAAATAAA

Function

symbol description
camsap3 Predicted to enable calmodulin binding activity; microtubule binding activity; and spectrin binding activity. Predicted to act upstream of or within neuron projection development. Predicted to be located in cytoplasm and microtubule. Orthologous to human CAMSAP3 (calmodulin regulated spectrin associated protein family member 3).

GO: NA

KEGG:

id description
K17493 CAMSAP; calmodulin-regulated spectrin-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01137145_01178626.mRNA True 5124 mRNA 0.51 23 1136997 1178626

Neighbor

gene id symbol gene type direction distance location
CI01000113_01096667_01106622 RDH8 coding downstream 30127 1096322 ~ 1106870 (-)
CI01000113_00907179_00957938 COL5A3B, COL5A3, COL5A3A coding downstream 178903 906941 ~ 958094 (-)
CI01000113_00770409_00789987 OLFM2, OLFM2A coding downstream 346314 770133 ~ 790683 (-)
CI01000113_00616541_00627359 NA coding downstream 509638 616361 ~ 627359 (-)
CI01000113_00611039_00611881 P2RY11 coding downstream 525058 610860 ~ 611939 (-)
CI01000113_01180049_01192316 XAB2, SYF1 coding upstream 1210 1179836 ~ 1192316 (-)
CI01000113_01208541_01221483 STXBP2 coding upstream 29263 1207889 ~ 1222083 (-)
CI01000113_01252186_01255334 NA coding upstream 73560 1252186 ~ 1255410 (-)
CI01000113_01259501_01275141 BRD4, BRD2, BRD3 coding upstream 80512 1259138 ~ 1275141 (-)
CI01000113_01351820_01359750 PBX3, PBX1 coding upstream 172786 1351412 ~ 1361658 (-)
G332524 NA non-coding downstream 18450 1117811 ~ 1118547 (-)
G332458 NA non-coding downstream 159474 977300 ~ 977523 (-)
G332427 NA non-coding downstream 267258 863334 ~ 869739 (-)
G332405 NA non-coding downstream 290185 838581 ~ 846812 (-)
G332415 NA non-coding downstream 382035 754741 ~ 754962 (-)
G332574 NA non-coding upstream 61045 1239671 ~ 1239956 (-)
G332523 NA non-coding upstream 67667 1246293 ~ 1246573 (-)
G332587 NA non-coding upstream 229194 1407820 ~ 1408432 (-)
G332596 NA non-coding upstream 364608 1543234 ~ 1543454 (-)
G332160 NA other downstream 690160 390227 ~ 446837 (-)
G332210 NA other downstream 1087512 47990 ~ 49485 (-)
G332649 NA other upstream 968588 2147214 ~ 2148558 (-)
G332837 NA other upstream 1072219 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 1188990 2356565 ~ 2370009 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025759 camsap3 coding NC_007114.7 CM002887.2 53352018 ~ 53449437 (+)