CI01000113_02007178_02015572


Basic Information

Item Value
gene id CI01000113_02007178_02015572
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2007178 ~ 2015835 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_02007178_02015572.mRNA
ATCTGTGCTTGGTTAACGTTATCTGTTAGCAAACAGCCTACATCTTTGCGGATAAAAGAGCAGTGGAATGCGGAGACATTTGTTCCTTTGATGGATGTTTAAAATCTGAATCAAAAACCCTGCATGTGACTGCTCAATCTGACCCAATACAACCGAACAGGAACGACAATGTGATTTTATTTTATGTCAAATAACACTCTAACGTGGTTTACATTTCAATACATAGACTACCCCAGACCTGTGCAGACCGCTGTAGAGAAAACATGGACAGTTATGAGGAATTCTGCGCACGTATTCTGTCCACACTGCAGTCGGAAATGATGCATGAAAAGAGCTGCAGTACCGCACCTGCGCGAGGGGTGGCGCTCCCTCTCATCTGCTTTCATGGCAGGCCAGTTCTGTCTCCTGTTCTAAGTGAGAAACAAAGAAGGGAGATGGCTGAATACAGGAAAAGAGCGTCACAAATGGAGGCAGAGAGACAGATTCATTGTAACAACAACCTCCTCAATCAGATTCAGGCCATTCTTTGGACTAATAAGGCACCAAAAATATTGGACGTGCCAAAGCCTTCAGAGCAGTGCTTGTCTCCTTCTCCAAAACCAGACTGCAGGAATGGTTTTACTGATACTGCACCTCTTACACCTGCTGGGGTCACAGAGCCTTATATTTTGTCTAGTAAGCCAGCAGTGACGCCATCAGCTGAGCTGAGAGGAAAAGCAACGGAGGAAAAACAAATGCCAGAGGAAACTGAAACAGAAGGAGTTTGTCTGCAGAACCTACTGAAGAAATCACGTGAATTTATTGAAAAAGAACAAGGTAAACAGGGGTCGAAAGTCATCGGCACGAAAATCACGTTTGATAAAGAAAACGGCAGTTCTTTAGATGGGACTGTCTCTGGTTTACCCTGTTATATTCCCGCACCTAATCAGACCTCTCCAAGTAACCTAATAAGTCCAGAATCTGGTCCAAATGGCAGTTTAAGTGCCAGACCCCACCGCGGGCGTCCTCGTCCCATTTCTGCTGGCAGCATCTTCTTCTCTTTCCCTGACAACCCCAACCAACCAAACATTACAGCCAATGCAAGGCCACAGGAAGCAAAAACAATTGCGACGCAGGAGAGGAAGCTACTCGGAGTGGAAAATGTGAGTATGGGTCGATACGATGACCACTTCAGGTTGAATGAGACCGTCGGTAAATTAGAAACATCTCCAGTGGATCCTGAGCTCACAAGCCCTCTGTTCCGAAGGAGATGCCACACTTTGGATAGCCATCTGTCTTCCCACCATCAGAGTCCGCTCATAGACAGGAGCCAGGAGAGAATGCCTCGGTTTATGGCCGGGGTCACTGCGAGAACGCCCACTCGACTGTCTCCTCCGTCACCAATGAACAAGACTTTCACCCGGGAGAGTCCCACAGCAGCATTTATAGGCTCTGGAATCACCCCAGACTCTCCTTCTCATGCCAAACTACCATTTGAGGGAAACAGTGTCATCAGCACAGCGCTGAAAGAGAGGAGAGCAGAACCATTGAAGAACGTTCATTTGAGAATAAAGACGAGATTTTCAGCTTTCTTTGATTATAGTATCCTCTCAGTTGTGTATGCCTGTGTTGAAGATGAGATGCAATGGCAAGTCCACGCTCTAGAAGACATGCAGAGGTCTCTGGAGGAGGATTATGCTTTCAGAATATCGTGTCTGGTGGCAGAGCAAGAGAGAGAACAACGGCTTCACAGTCAGGAGTTGGAGGAGCGGGTCTGGAGACTGAGGGGTCAGGGTGGTCTGAGTCCTGTAGCAGGCGAGGACGGGTGTGAATTAAGGGCAACGGGTGAACGTTACCCTATACTGAGCCCCATGTGCCCTTTAAGCCCTGGAGAAAGATCACCGAGACACCATGTGCCAGTCATTGGTTTTCCTCCAACCAGTTTAGATGTGGCATCACCCTCAATACAGGCCTCTATTTACATGAGAGGCCTCAATCATCACAGCACAGGAAAGAGCAGAAACAGGCTGAGCCAGGTTGTAACAGCGGAGCAGCAGAGGGCGCTGTGCCGCCTCACTGCCATCGTGAAGGGCTTCCTGACCAGACGACTGCTGAGAACGGAGAAAGTCAAACACCTGCGTCAAACCGTTCAAGACACGCAAGAGTTTATTTGTTCATTCAGCACTAATGCTCCTCAAAGAAACGACCAACTGTCAGAGCAAGATCTCTCCCTGCAAGAGCGTGTCAGAGCTCAGTTACGTGCAGCCTTGTTTGACATTCATGATATCTTCTTCACAATGACACTAGAGGAGCGTTTGTCTCTGCTGCAACAAGACCGAGATCTACGCACTGAGAGAAAACTCAGAGAGATGGAAAAAGCAAAAATCCCCAAGGACAAGGTGATTTTGTCTGCTGCAACCCAGAAATCTCTTGATAGAAAGAAAAGAGTTGGTGAATCTCCAGGTCAGACCAGACGAGCTCAGAAAACCCCTACAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_02007178_02015572.mRNA True 2479 mRNA 0.48 11 2007178 2015835

Neighbor

gene id symbol gene type direction distance location
CI01000113_01917876_01982420 PRKAR1B coding downstream 24758 1917286 ~ 1982420 (-)
CI01000113_01908893_01913809 NA coding downstream 92950 1908739 ~ 1914228 (-)
CI01000113_01871256_01883265 PDGFAB coding downstream 122778 1870390 ~ 1884400 (-)
CI01000113_01854931_01857730 NA coding downstream 148303 1854766 ~ 1858875 (-)
CI01000113_01846674_01851715 BTBD17B coding downstream 155388 1846368 ~ 1851790 (-)
CI01000113_02127709_02131244 DHYS, DHPS coding upstream 111374 2127209 ~ 2131244 (-)
CI01000113_02136165_02143106 NA coding upstream 119489 2135324 ~ 2143106 (-)
CI01000113_02159290_02165087 SLC25A19 coding upstream 142875 2158710 ~ 2165087 (-)
CI01000113_02170894_02179511 AMDHD2 coding upstream 154926 2170761 ~ 2181419 (-)
CI01000113_02193825_02200601 TUBB4A, TUFM coding upstream 177520 2193355 ~ 2201275 (-)
G332751 NA non-coding downstream 173873 1832400 ~ 1833305 (-)
G332670 NA non-coding downstream 175329 1831421 ~ 1831849 (-)
G332731 NA non-coding downstream 182746 1770014 ~ 1824432 (-)
G332666 NA non-coding downstream 268482 1709639 ~ 1738696 (-)
G332657 NA non-coding upstream 1507 2017342 ~ 2017775 (-)
G332645 NA non-coding upstream 27004 2042839 ~ 2045887 (-)
G332679 NA non-coding upstream 94855 2110690 ~ 2112552 (-)
G332663 NA non-coding upstream 96850 2112685 ~ 2113398 (-)
G332652 NA non-coding upstream 97689 2113524 ~ 2114332 (-)
G332160 NA other downstream 1560341 390227 ~ 446837 (-)
G332210 NA other downstream 1957693 47990 ~ 49485 (-)
G332649 NA other upstream 131379 2147214 ~ 2148558 (-)
G332837 NA other upstream 235010 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 351781 2356565 ~ 2370009 (-)

Expression


Co-expression Network