CI01000113_02418950_02434326


Basic Information

Item Value
gene id CI01000113_02418950_02434326
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2418950 ~ 2434456 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_02418950_02434326.mRNA
GAGCCTGTTCAGGAGTGGGGCGAGGAGCATGAAGACGGGGCAGTGTTTGGGATCACCCTGCGCAGAGAGCCAGTCCAGCAGTCATCTGAGCCCACAGAGGCTTTCGTTCAGTACCGCACATGTAAAGTGCGCAGGTTAAAAGCGGCCACGCTGGACAGGCTGGTCTCTCACCTTCTGGACCCCTGCTGTCAGGAGCAAGACTACGGCAGGATACTGCTGTCAACGTATCGCACCTTTACCAGCTCCAACAAACTCATCGAGATGCTCTTCCAGAGGGAGAACTTTGCCTCTGCACTTGACAGCACCAATTACCCTAACAGCTCTTTGTGGAGTTTGCTTCAGATGTGGTTGGATGAGTACAGCGATGATTTCAGGGAGCCTCCCATGCACTCTTCCCTGCGTCTCATGTGTTTACAGCTGAGAGGACGCCCTTCTCTCTTCCCCCTGGCTAAACACTATGAAGCTCTCCTGAAGAAATTCCAGACTGAAGATGTTGTGACAGGTTGTCCAGTTGATCATATGGATGAACCAGCCTTGAATATGGAGGCAAAAGACTTTGAGTCAGAAAACCTTGCAGATTTCATGGATTTCTCCATCACAGATGTTGCAGAACAGCTCACTCGTATGGATACTGACTTGTTCATAAAGGTGGTCCCTTTCCAATGTCTGGGCTGTGTGTGGTCTCAACGAGACAAGAAGGAGAACCTCTCACCCACTATTTGGGCCACCATCTCCCAGTTCAATGCAGTCACCAACTGGGTCATCACTTCTCTGCTTCGTCCCTCGTCTATTGCTTCATCCTCCCCAACCACACAAAGAGCGAGAGTCATAGAAAAATGGGTGCGGGTTGCACAGGGGTGCAGAGAGCTGAAGAACTTCTCCTCTCTTAAGGCCATTTTATCTGCCCTTCAGTCTAACCCCATCTACAGACTAAGGAAGACCTGGGCAGCTGTGAGCAGAGAGGCCGTGTCTGTCTTTGAGAACCTGTGCAAAACGTTCCCAGATGAGAACTGTGTTCTGACTAGCCGAGAAATCTTTGTTGATAGCTCAGCTGGAGGAACAGTTCCATACCTGGGCACATACCTTACAGTACTGACCATGCTGGACACTGCCCTACCAGACACCGTGGAGGGTGGTCTCATAAATTTTGAAAAGAGGAGACGGGAGTATGAGATTTTAAGGCAGATCCGTCAGCTGCAGGCCTCGTGTTCTCAGTATGTTTTACCCCGTCATCCTCAGATCGCTGCCTGGCTACAGAGTCAGAAACTGCTGTCAGATCAAGAGAGCTATGAACTTTCCAGACAGCTGGAGACTCCTCATGATACTTCTCCATCCAACAGCGGCTGGAGTCACCGAACTCTCACTAAAAAGCTTTCATCGCTCTTGTCAGGAAATGAGGGCTCCAGAAAGAACGCAGATCAGATCAGCGTGTCCTCGTCAGGATCCAGCAGCTCTGAAATTGAGGAATCAGTGTCTTTTATACCACCGTCTCTTTCTAGTTGTGGTCAGAACACGTCCGAGGCTTTTCCCTCATCTTCCTCTCCTGATTCTTCCACCATGTCTAGTTCATCCTCCAGCTCTCAGCAGGATCTCAATCTTAATCCATCTTCCTCCTCCTCATCTTCAGCATCAGCTGACCCTCACCTGGTCTCCTGCCATAAGCGCTCGGTCTCCATGACCTCCCTGCCCTTCTACAACAGACAAGTGGATGACTCCTGCATCATCAGGGTCAGCGTGGAGTTCTGCAACAATGGCAACATGTACAAGAGCATACTGGGAATCATGGCCAGTGTTTTGTTTTATGCAGTGCTCTGCTGGGGATGTAGTATCACTGTTGATGATAAAAATAGGATTAATAAATTGATTAGAAAGTCTGGATCGGTTATTGGCCTTAATCCTGATTCACTTGAGTTGACCAGTCAGGATAAGACGGCCCAGGTGATCCAGAGAGCTCTGCAAAAACATAACCTGGAAGATGTTAGTGAGCAGGATTTCACCCTTGTACAAGTCCTGGCCCAAGGCAGAGAGTTGCATATTCCAGAAAAGGCCAACGTATTTTACGCCATGTCTTCATCAGCCAACTATGACTTTGTTCTACGCCGATGCCCAAAAGGCCAACGGAAGCAACTCATACGCTCAGTTTCACTGTCATCAGGACGAGCAACGAAATAACAGAGGATTCAGCCTTGATTTCTGGAGGATTCATATTTCCTGCGCAATCAGTTGCTGAAAACCGTCAAGACACAAGTCATTCAGACACAAATGGAAATGTGTGAGATTGAAAACAAGTCATTTAAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_02418950_02434326.mRNA True 2302 mRNA 0.49 16 2418950 2434456

Neighbor

gene id symbol gene type direction distance location
CI01000113_02387553_02403367 SLC44A2 coding upstream 15583 2387553 ~ 2403367 (+)
CI01000113_02342987_02345449 SYCE2 coding upstream 72944 2342987 ~ 2346006 (+)
CI01000113_02321704_02328603 FARSA, FARSA.S, SYFA coding upstream 90087 2321704 ~ 2328863 (+)
CI01000113_02300492_02320320 ILF3B, ILF3 coding upstream 98380 2297820 ~ 2320570 (+)
CI01000113_02293534_02295639 NA coding upstream 123262 2292344 ~ 2295688 (+)
CI01000113_02548934_02576888 TBL3 coding downstream 114478 2548934 ~ 2577790 (+)
CI01000113_02623348_02657507 TOM1L2 coding downstream 188681 2623137 ~ 2657507 (+)
CI01000113_02685260_02707606 SREBF1 coding downstream 250804 2685260 ~ 2708849 (+)
G331982 NA non-coding upstream 13962 2392317 ~ 2404988 (+)
G331979 NA non-coding upstream 46947 2371802 ~ 2372003 (+)
G331978 NA non-coding upstream 48373 2370374 ~ 2370577 (+)
G331977 NA non-coding upstream 48939 2369772 ~ 2370011 (+)
G331976 NA non-coding upstream 49768 2368884 ~ 2369182 (+)
G332017 NA non-coding downstream 24733 2459189 ~ 2459471 (+)
G332037 NA non-coding downstream 83385 2517841 ~ 2518152 (+)
G332009 NA non-coding downstream 103289 2537745 ~ 2538362 (+)
G332039 NA non-coding downstream 105971 2540427 ~ 2540655 (+)
G332042 NA non-coding downstream 121317 2555773 ~ 2557247 (+)
G331759 NA other upstream 590047 1668002 ~ 1828903 (+)
G331767 NA other upstream 755695 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 993244 1424968 ~ 1425835 (+)
G331615 NA other upstream 1172377 1246291 ~ 1246573 (+)

Expression


Co-expression Network