CI01000113_02293534_02295639


Basic Information

Item Value
gene id CI01000113_02293534_02295639
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2292344 ~ 2295688 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_02293534_02295639.mRNA
CTATAAATACAGCAGCGCGCGCGGGTCACGCCGCAGACCGTCACGATCTCCGTCGCACTCTCTGCGTGTTTTTATCTACTTTATATTCGTTCACATTGGACTTTTCTCGGACGATAGATACTATTAATACCAATGAACATTGTTATTTAGACTACAAAGACACTTTTATTCGAACTGGAATAAGTTTTTTCTTCTCCTCAGGAATAGCCTAAGTAGTAAGACTCTTCAGACTAAACGGATGATGGGAGTCTGATATCGCCTTTCGATTCTCAAGGGCTGTTTATTTCATTTTTCCGCCTGTGTTGGTTAAAACGTTATAAGATGTTCAGGTGGAGTGGTGCAGCTTTGGATAATCTGAAACTCGTCTCAAATGGTAAATATTTCTCTTTTTTTCCTCATTTTAAATTGAAATAAGCATAGAGACAAAAAAGAACTCCAAGCTAAAATGTAGACTTATTCAAATGACTGGTAGGCTACTGTGATCTGAACCACTGCAATACAAATTGTATTAATCGTATGTATTATCTTATTAATGTATATTAATTTACCTGATCTGACCCATTAAAATACTTTACACTTGGTGTAATGTAATCAGTTACAGTAATTTCGACATTAAATGATATTTTGATTAAAAACTGTTAATTTAGACTACGTGACCAACATTTTTACAGTGTTAAATATTACTTGTACTTATTTTTGCTATTGCAGTATCTCCAAATAGTTGTTTAGTTCTCATTACTGAAAAATAAAGTGGTGAATGATTAGAAGTGTTGCAATTTGTACTGCACTTTTTGCTTTCTCATGTACCCTAAAGAGGAAATTGTGAAAAACAATGTTCCTATTCACTAAAGTTTTCTTTAAGGTGTGTCAGTGTATAATTTCAGACCTCTGGACAAAACTTCCCTCAATAAATGTTTGTGCGTAAACAAGAAAAAACAGCATAAACAGGAAGGAACATAATCACTTGCTGATTAAATTGGTCCAAATCGCTGAGCTTTGTGGCCAAACTAAACAGTACATCACTATTTTTACATCTTTGTTTGCTAATGAAGCTATATGCACATAACTGAGTTAAAGATGCTCATCTCAGCTTTAAATGCCTCAGCTTTACACTTCTTTCCTTATTTCCTTTTCCTTATTTTTTAGCTATGTGTCTCTAAGGTCAATGGTACTTGTCCCGTAGCCTGGAGATGATCCAACACTGCAACTGTTCAGCCCTGGTTGAGGATGGAGCGCTCATCAATCAGACCCAGACGATGTCTCCGGTGCGCTGCAGGCAAAACTCCACACACAACCCCACGGCAGCAGGCCTGTCGATGACACTGGGCATCGTGTCCAACATCATAGCTCTGATCATCCTGGCTAAAGCGTACGCTCGCCTGCGGAAACGCTCCAAAGCCACATTCCTGCTGTTTGCCAGTTGTCTGGTGGCGACAGACCTTGCCGGTCATGTTATTCCAGGTGCCCTGGTTCTGCGCCTCTACACTGACGGGGGATTTTGTAACCATCCCGATGCCACCTGCCATTTCTTGGGCGGCAGCATGGTGTTCTTTGGCCTGTGCCCGCTGTTTCTCGGGTGTGGCATGGCGGTCGAGCGGTGCATGGGTGTAACGCGGCCTCTCCTGCATGCCCGCGTGGTTTGCACCGCACGCACCAAGGTGGTGCTGGTGATGATATGGTTGTTGGCTTTAACTGTAGCACTGCTGCCCTTCTTTCATCTGGGCACATATACCTACCAGTACCCATGGACCTGGTGCTTCATTAAGGTGTTAGACAAAACAGGCATGACAGACGTGTTGTTTGTGCTGCTCTTTTCTGGACTGGGACTAGCCTCGCTGGCCGTGGCATTGATTTGCAACACCATCAGCGTGATGACACTGGTGATCGCCCGTCTCCGCAGGAAGAAGTGCAACCGCAGGTCAGCTAAATCGCATGACATTGAGATGGTGACGCAGCTGGTGGGCATTATGGTCACTTCTTGCATCTGCTGGAGCCCTCTGCTGATCTTCGGTCTGATGTCAGTCACCAGCTCATACAGTGGCTCTGTGGGAAATGATCTGAAAACCTACAGGACTTTAATGGTAACAGGAGTGCGCCTGGCCTCCTGGAACCAGATTCTGGACCCATGGGTTTATATTCTTCTACGCCGGGCCGTCCTCAGAAAGATCTACCGCTTAACCACCGGCCGCAGTGACCTTAAGGGGAGCACATTCCGGCGGTGGGAGATCAGCTCCTTCCAGAACTCACTGAAGAACGCAATTAATCTGAACTAATGGAGCGAATGTAGTTTGAACTCTACCACATGGAAAAGACTAGGAAAGA

Function

NR:

description
prostaglandin E2 receptor EP1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_02293534_02295639.mRNA True 2322 mRNA 0.44 2 2292344 2295688

Neighbor

gene id symbol gene type direction distance location
CI01000113_02227694_02239947 WIZ coding upstream 52252 2227694 ~ 2240092 (+)
CI01000113_02216033_02222467 NA coding upstream 69877 2215947 ~ 2222467 (+)
CI01000113_02210912_02211861 NA coding upstream 80257 2210912 ~ 2212087 (+)
CI01000113_02203100_02206995 HSPBP1 coding upstream 85261 2203100 ~ 2207083 (+)
CI01000113_02183987_02191396 NOG5 coding upstream 100841 2183560 ~ 2191503 (+)
CI01000113_02300492_02320320 ILF3B, ILF3 coding downstream 2132 2297820 ~ 2320570 (+)
CI01000113_02321704_02328603 FARSA, FARSA.S, SYFA coding downstream 26016 2321704 ~ 2328863 (+)
CI01000113_02342987_02345449 SYCE2 coding downstream 47299 2342987 ~ 2346006 (+)
CI01000113_02387553_02403367 SLC44A2 coding downstream 91865 2387553 ~ 2403367 (+)
CI01000113_02418950_02434326 NA coding downstream 123262 2418950 ~ 2434456 (+)
G331939 NA non-coding upstream 41990 2249934 ~ 2250354 (+)
G331937 NA non-coding upstream 44920 2246971 ~ 2247424 (+)
G331831 NA non-coding upstream 138227 2153717 ~ 2154117 (+)
CI01000113_02133051_02135286 NA non-coding upstream 155679 2132839 ~ 2136508 (+)
CI01000113_02111396_02122911 NA non-coding upstream 171385 2110635 ~ 2123037 (+)
G331971 NA non-coding downstream 62501 2358189 ~ 2359966 (+)
G331948 NA non-coding downstream 67886 2363574 ~ 2365297 (+)
G331976 NA non-coding downstream 73196 2368884 ~ 2369182 (+)
G331977 NA non-coding downstream 74084 2369772 ~ 2370011 (+)
G331978 NA non-coding downstream 74686 2370374 ~ 2370577 (+)
G331759 NA other upstream 463441 1668002 ~ 1828903 (+)
G331767 NA other upstream 629089 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 866638 1424968 ~ 1425835 (+)
G331615 NA other upstream 1045771 1246291 ~ 1246573 (+)
G331487 NA other upstream 1370211 917735 ~ 922133 (+)
CI01000113_02548934_02576888 TBL3 other downstream 273079 2548934 ~ 2577790 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025142 ptger1b coding NC_007114.7 CM002887.2 13830599 ~ 13837063 (+)