CI01000130_00648367_00657797


Basic Information

Item Value
gene id CI01000130_00648367_00657797
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000130
NCBI id null
chromosome length 2145203
location 648169 ~ 657797 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000130_00648367_00657797.mRNA
ATGAATGGAGGTAAAGATAGGGAGGGTGGGGATGGCAGAGGGCAGCTCGCCCAGGTGCCCATCGGCTGGCAGCGAAAGGTGGAGTCCTCGGGTGTCGTTTATATCAGTCCAAGTGGATCAGTGCTGTCCTGCCTCGAGCAGGTTAAGTCTTACTTGCTGACTGATGGCACCTGTAAATGTGGTCTGGAGTGTCCTCTCATCCTACCCAAGGTTTTCAATTTTGATCCTGGTGCGGTGGTGAAGCAGAGGACTGCAGAGGATGTGAAGGCTGATGAGGATGTTACGAAGCTTTGCATCCACAAGAGGAAGCTTATTGCTGTGGCGACGCTGCATAAAAGCATGGAGCTGCCACCTCCTTCCCTAACACTCACCAGTCCAGGTGGAGGCACAAGTGTGACCTCCATGACCCCTAACGCACAGCCTCGAGCAATAAGGAATAAAACCCACGAGGGCCAGCCAGAATGTAAGAACCCATTTAAGGTGATGATGGCGACGGGGCAACGGCACTTCTCTCCGGATCTGTGCGGCCCGCAGCAACAGGATGTTTTTCCTGCATACTCCAGGCAGAGACTGGCCAGCGGTGAGCCAGGGCCCAAGTCTCCGTACCGCAGTGGGCACGGAGGCATGTTGAGCCCTCCCTCGCAAGCCTTCGGGGATGGTTCTCTGTCCCCAAGAACAGACGCTATTGGCAGTCCCGACGGGTTTGTACGCAACAACCCCTGTGGCTTCCAGGGGACCGGCAGTCCCAGCACCATCCACAGCAACAGCCGCATCCCTTTGTCTTCTCCTGGGGTCATGATCCACGGCTCACCCGCCACCCAGTCATCCTGTGTCATGGCTGGAAGGACTAACATGCCTCTGTCCCCCCCAGTCCCCAACAAGAGCCCCGTCATGAAAAAGCCCCTGTGCAACTACCCGCCCAGCATGGACTCGAGCAGAACTGTGTTTCACCACAAGGCTCCATCTGCTCCCGCACCCCCTCTGCCACCTCCCTGTGCCCTGCAGAATAAACAGGTGAGCTCCGAAAAGGACCCTCTTGGCATCCTGGATCCCATTCCCAGTAAACCGAATCCATCTACTTTCCAGCCCAATGCCCACTCTCAGGTACCAATGGTGAATGTAAACATCCCTCCTGCCATCGTCCCATTGCCGAGCAACCTGCCTTTGCCCACGGTGAAGCCGGGGCCGGTTGGTCACATGCAGAGGACTCAGCACGGCACAGCCACATCCATCTCCCCGTCACCCGTCACCTCTCCTGTTCACATGTCTGGGCCCTCCCTGGGCCGGATGGAAGTGTCTCCACAACGATCCCGCTCCTCGTCCACCTCCTCCGAGCAAGGCAGCTTTGCCGTTCCCCCGTGCGGCACTATGAAGGTCCCGCCACGCTCGCCCAGATCCTCCATGAGTTCGCCCCGACCTGCTTTGCCTTCCAGCCCATCTGGCAAGCCGGACGTTCTCCACCAGTACAAAGAAATGCCCACCCAGCTGCTGGCAGGGATGAGTAGCAGCATGAGCAGTCAGCACAATCCAATGTATCCCCCCGCCTCAGGCGGCACCACGTCGCAGAAGGAGCACCCGGGCCTTTTGGGAATGCCACTGAACCAGATCCTTAACCAACACAACGCTGCCTCTTTCCCTGCCAGCAGTCTCCTCTCAGCTGCCGCCAAAGCACAGCTAGCAAATCAAAACAAGCTTGGAGGAGGAGGTGGCTGCAGCGGTGGCGGCACTTGCGCAGGCAGTGCAGGGGCGTCTGCAGGGCTCTCTTGTCCTCTCGGTGTGACTGATACCAACAGGGCTGTTGAAACCCACAATACTTTAAATCCTATGTTGCCACCCAACCCTGCCATGATTATGCCCAGCAGTGAGGGCCAGAGTGGACGTGCGGCCCTTCGGGACAAGCTCATGGCACAGCAGCGTGACCCTCTCCGCAAGCGCAAGCATCCTCCAAATGCTGCTAACCACGAGAACAATTTCTTCAACATGGCTGGCATGAGGACGCCCTGCTCTTCCACCGAGCAGATGAGAAAAACCTCTCGACTGCCCTCGAACACATCAATGGCTCAATTACTCCAATCTCTGAGCAACCACAGCTCCCACATGGCCAGGGGCAGAAACCCAGGCCTTGTAAGTCCCAGTCGTGTGCACTTTGGCGAGGGGGCCGTGGCCTCTGGTGCGGCGCCTCAGAGCGCACAAGTACAGCAGCGGCTGCATGGCCAGACGGAAGCCATGCTCTGCCCCGGTGTGGAGTCCCAGAGCCAGTATTCAGGCATGATGAACCAGATGCAGGCTACAGCGATGGGAAACTGTGGACCTGTGAACCAAGGCGGACAAGTTCCTCTCGGAAACCATGTGATGGGACACACAAGCTCTCACTTTCAGCAGCGTGTCCAGCCAAACGTCAGCTGCATGCTGCCCAGCAGCAGTGATGCCTGCTGCTCACAACCCATGACTGACACAGGTAAGGAGAATATTGAGTACTTGGTTCTGTAGTGATATTTTGTTACACTAAATTGGTATTGAGAAATCTCATATGGTAATGCAAGATTTTGGTTATCTCACCTGCCCCTAAGTTGCATGCTTTTTGGTTTCTTTTACCTTATTGGATGTTTTAAATACCTTGCCTTGGTAAAAACAGTAGTGAAGTTTCTTCCATTGTGGCAACTCCTAATTACTAAAGAGGCTAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000130_00648367_00657797.mRNA True 2688 mRNA 0.56 4 648169 657797

Neighbor

gene id symbol gene type direction distance location
CI01000130_00634933_00636447 NA coding downstream 11722 633875 ~ 636447 (-)
CI01000130_00628690_00630753 CRYGM4 coding downstream 17406 628652 ~ 630763 (-)
CI01000130_00571574_00572745 NA coding downstream 75182 570606 ~ 572987 (-)
CI01000130_00238758_00239855 MLRN, MYL9A, MYL9B, MYL12.2, MYL12.1, MYL9 coding downstream 407165 238484 ~ 241004 (-)
CI01000130_00000668_00019676 NA coding downstream 628493 421 ~ 19676 (-)
CI01000130_00678322_00701965 KIAA0430 coding upstream 19784 677581 ~ 703310 (-)
CI01000130_00775147_00778644 NA coding upstream 117290 775087 ~ 778644 (-)
CI01000130_00780796_00795977 KEAP1B, KEAP1 coding upstream 122697 780494 ~ 796115 (-)
CI01000130_00811298_00812464 NA coding upstream 152256 810053 ~ 812464 (-)
CI01000130_00849848_00852511 NA coding upstream 191938 849735 ~ 852606 (-)
G343325 NA non-coding downstream 46738 601208 ~ 601431 (-)
G343320 NA non-coding downstream 81364 566601 ~ 566805 (-)
G343319 NA non-coding downstream 82654 565227 ~ 565515 (-)
G343318 NA non-coding downstream 90589 557374 ~ 557580 (-)
G343269 NA non-coding downstream 179389 468087 ~ 468780 (-)
G343331 NA non-coding upstream 7417 665214 ~ 665461 (-)
G343339 NA non-coding upstream 59351 717148 ~ 721934 (-)
G343343 NA non-coding upstream 70026 727823 ~ 736566 (-)
G343287 NA non-coding upstream 80991 738788 ~ 747071 (-)
G343347 NA non-coding upstream 95675 753472 ~ 753684 (-)
G344167 NA other upstream 1192828 1850625 ~ 1853084 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031727 mbd5 coding NC_007117.7 CM002890.2 48862 ~ 60202 (+)