G356386


Basic Information

Item Value
gene id G356386
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000147
NCBI id null
chromosome length 707134
location 675197 ~ 677479 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU406339
TAACGTCTCACACATTTTATGGTGCGCAAACATTAAGCAGACATGTACAGAGACCTCATATACATTAGCGACAATTACCTTCCACAGTCCGTTGAGCAATAGAATACAGCGCTCACTCTCAGCCCCACCCACAAATTAGTCAGAGGGGTGGGGCTAAACGCAAGCCACACCCACAAGTCATCAATAATGTGTGCTGTCCCCTCCACTCACTATCTGAAACCAAGTGCACTTGTTTGGCACCTTGCCAGACTCCAGCGTTGGGGACATGAGTGTTTTAAAACGAGCCACGGCAGCTAGCGTGATGGCAGATACATCATTTATAGTGTTAGAGAGAGTATGAAGGGCGTTACAGTCATTTGTTTTCTTTAAAACTTTAAGTGCAAACGTCACCAGTTCCACTGCTGGCGTCAGGGCAGATAACAAGTGCACTTGTTTTCCTTCGCAAAACAGCAGAGCAGAGTTTGATACAGTATTTGAAACAGACATCATGCTCGGAGGAAACGCTGTGAGGATATGAGCTTGTGTGCATCGAAAATAAAAATAAAGAAGATCAGAGCATCGCTTTCTCCACTAAAACACACACATCTTATCGCACACATTCAGCATCACCGCATACGTCAACACACACACACAGTCATCCAGGTCCTGAGGGGAGGGGCTTATGATAAAGAGCGCTGTGATTGGACCAAATAATGTGTGTCATTAATTTGTGTCAAATTAAATAATTACAGTCTATAAATCATTTAGAGTACCATACTGTAGACCCCGTTAAAATAAACTATAGGAGGGAATTGCGGGAAAAATACTTTTGAATGTCCTATGCATGGCAAACAAACTTTTGATTTTGAATGTGACATAATCAGATATCATACAAAAACAGGCAGTCAGGAGTTGTGTAAATCTCACGAAAATGTTCAAGTGAATCAAAATAATTACATTTTACATAAAGAAAATTAACCCTGTCTTTAGAATTAAGATTTTTAATATTTTATACATTATTCAAACATTTTCCCCCAAAATTCATTACTGCAATCTAGTAAGTTCTCGTTACTGCGATGTGGGAAAAATAGCAGTGCTGTCAAACAAAAATTGCGATTAATTGTTTGACAGCACTAAAAATAGTATTTAAAATATAATATAATTACATAATAACAGCAGTTGTACTGGCTTCAGTTTATGCAGATTCTAATAAATAAAAGCTCTTTGTGGACATCATGATCCTTACTGTATTACAGTATGAGAATTTATTTTTCATTCATGACAATGGCCTTTTTTATGCAGTACCATAACAAAAAATAAGTACATGAGGGTTAAATGTGCATAAAGGTCAAAAATATCAATGCAATTAGTCATATAAACAGAAATTCATCCTAAAGAAAATTGGGTTCCTGTTCAATGCATGTATTTTATTCCAGTTTGTAAAGGGGAGACGCAAGATTTCCTAGGAAATTTTTTTTGTGAACAGTGCCATCTATAGAGCACAACTGGAACTGCTGCAGTAAACAGCATCATCACACACACGCGCACACACACGCACACACACACGCACACACACGCACACACACAGCTTAATGGCCTGTATCTGCATAAGGCAAAGCATAAATGCACACAAACACACACACTAATTTAAAGCAGTGTTAAAATAAGCAGTAAGAGTCGTGTAGGACGAGAGTCATTCGCATAATCTTCAGTGTCCCACATCTATTGTGCGTGTGAGACAACCGACAGTACATGAAAGCTGATATAAATATATTTATGTATAATACGTGTACGGTGCTGCCCCATCATATAGGCAGGCAGCACGCATGCACGCTGGTAGCCAAACAGATGGCATTGTGGGAAAGGTAGTTCAAGAGGCCAGTGGGACGTGAGGGTGGGCTCACTTTCTTTCTGTCTTTACAGTCCGTTTCAACCAATCGCTGCAAAGGGCCGATCACATGTCAGACCAAAGCACGGCCTTGCTGCCTTTCTCAACGCTGACAACGTACGCGCCCGATGGAGACCAAGACACCGAATTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU406339 True 2021 lncRNA 0.40 2 675197 677479

Neighbor

gene id symbol gene type direction distance location
CI01000147_00631877_00639420 MB21D2 coding downstream 35777 630584 ~ 639420 (-)
CI01000147_00614373_00614621 NA coding downstream 58769 613787 ~ 617189 (-)
CI01000147_00586020_00603643 NA coding downstream 68985 585848 ~ 606212 (-)
CI01000147_00546348_00552951 NA coding downstream 122246 544167 ~ 552951 (-)
CI01000147_00491199_00512572 DYNC2H1 coding downstream 161982 491199 ~ 513215 (-)
CI01000147_00700597_00701633 NA coding upstream 22647 700126 ~ 702455 (-)
G356423 NA non-coding downstream 5110 669823 ~ 670087 (-)
G356382 NA non-coding downstream 19114 652687 ~ 656083 (-)
G356384 NA non-coding downstream 91098 582941 ~ 584099 (-)
G356368 NA non-coding downstream 254819 419752 ~ 420378 (-)
CI01000147_00252331_00335060 GRIA4A, GRIA4 other downstream 418327 248563 ~ 335060 (-)
G356274 NA other downstream 624298 48047 ~ 50953 (-)
G356249 NA other downstream 635355 14927 ~ 39842 (-)

Expression


Co-expression Network