CI01000152_02086974_02089993


Basic Information

Item Value
gene id CI01000152_02086974_02089993
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 2086488 ~ 2090050 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_02086974_02089993.mRNA
AGTTTGTGAAGTTGGATCACTTCGGACCACCCGAAGCACTGTTAGGACAAATAAGGAATGAAAGCTACACTGCAGGCTCTGGTGTTCTTGATACACGCTATAGGACAAACTGCTGTGGGACTGAGGCAGGTGCTCGGCTCAGCGTGGAGAAAGGTCTTCTTGAACCTTCTGGAGGGCACAGAAGCCCACGTGACAAGATTCCTGCCTGTCATGCCAGCGTACATCACACTCTATGCCAGTACAGCGGAGATCAGCTTTTCTGTTCCTTTCTTCTCCCGCTCTCATCCTCGCGGATCTGGAGTTCTTCAAGGAAGACGCAAATAGAAGCAGCCTCGCTGACTGCTTCCTCCTGCATCTAATTGGTGGTTGTGTAAATGTGTGCGTGTGTGGAGCGGATAGAAGGAAATGGAGGATGAATGTGTAATCATTTAGATGTTCTTCTCATTTGGCTGTTTTGTCTCTCAAATTATATACTGTGTTCACTGCAGCCTGAAATGAGCCTAAAATGGCACTTGCTGTTGAATACTGTGTCCTCCCTGTCAGCTGTGTGTCTGTTTGGTGTTTTGTGTGCACTTGGAAGTGTACGAGGTGTGAGTTTGTGTTTGTGCAACTTTTTAGTCTATGTACATATGTAGCGTGAGACAATGTATGCTTCTCTGTTACAGACATCAAAGGAAAAAAGCTTCAGTCTTAAAATCTCCAGATACTGAAACAACAACACAGTCATTGCCTAATCCTGTCTATTTTCTGTCTCTTTCTTTGACTACCTTTCATTCCTCCATGTTCTCAGCGGAACATTCTCTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_02086974_02089993.mRNA False 810 mRNA 0.45 3 2086488 2090050

Neighbor

gene id symbol gene type direction distance location
CI01000152_02066678_02068178 NA coding downstream 18204 2066430 ~ 2068284 (-)
CI01000152_02015257_02024292 CAPN10 coding downstream 62196 2015257 ~ 2024292 (-)
CI01000152_02006897_02010593 EIF4E2 coding downstream 75895 2006352 ~ 2010593 (-)
CI01000152_01999033_01999195 NA coding downstream 87293 1998783 ~ 1999195 (-)
CI01000152_01917798_01946700 NA coding downstream 138424 1916703 ~ 1948064 (-)
CI01000152_02190690_02206511 NA coding upstream 100632 2190682 ~ 2206658 (-)
CI01000152_02334753_02345817 GPSM2 coding upstream 244118 2334168 ~ 2345817 (-)
CI01000152_02427978_02434593 NA coding upstream 337469 2427519 ~ 2434593 (-)
CI01000152_02440117_02451100 NA coding upstream 350067 2440117 ~ 2451822 (-)
G359372 NA non-coding downstream 27334 2046382 ~ 2059154 (-)
G359429 NA non-coding downstream 131635 1953012 ~ 1954853 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A non-coding downstream 193029 1890149 ~ 1893866 (-)
G359318 NA non-coding downstream 202546 1883554 ~ 1883942 (-)
G359709 NA non-coding upstream 70302 2160352 ~ 2175594 (-)
G359701 NA non-coding upstream 131878 2221928 ~ 2226863 (-)
G359737 NA non-coding upstream 160430 2250480 ~ 2252239 (-)
G359745 NA non-coding upstream 185793 2275843 ~ 2316256 (-)
G359791 NA non-coding upstream 238945 2328995 ~ 2329399 (-)
G359178 NA other downstream 742483 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1521204 560484 ~ 572648 (-)
G359788 NA other upstream 228218 2318268 ~ 2318734 (-)
G359800 NA other upstream 278942 2368992 ~ 2459836 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G15632 NA non-coding NC_053113.1 CM020910.1 9518031 ~ 9653954 (+)
tiger barb (Puntius tetrazona) G14316 NA non-coding NC_056700.1 CM032069.1 21719918 ~ 21720575 (+)