CI01000152_01917798_01946700


Basic Information

Item Value
gene id CI01000152_01917798_01946700
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000152
NCBI id null
chromosome length 3381324
location 1916703 ~ 1948064 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000152_01917798_01946700.mRNA
AAATCTTTCCACCTTCATTTGCTCTGTTGCCTTTGACTTTTGCATCTACCTGTGATTTACTCAGCAATGCGTCATATTAAGTGTTTTTCAATGTTGTGGCATTGTTCCATGTGCTTGATGCCTAATATAAGACACTGTAAATTACCATTTAAAAAAAAAAAAAAAACTACACAATTTATCTAAATGCATTTAGAAATATTGCAACAATGTTGGCCAAAATACAAAATATTTAGTTGCAAGACATTACTACAACTCAAAGTCAGCAAGTCAAAAGTGAATCTTCAATCTTAATAAGAGCAATTTACTCGCGAACACTCACTAGTGTGATGATTGTATTTGTGTGCGCTTGACATTTAATCATGGCACAGTAAATCTCAGTAAGTAGACCAGTGTCCAGGTGACAGGTGTTAGTGCACCTTTTTCAAGGAGCACCATGTGAGACCTTGTGCACAGAACAAACACCACTGCATCCTCATTTACTATTGTTTCATATGGATTCTACATGCTCAATATTTATTTCCCCCTTTAGATTGATCATTGGGCAGAAAATGATAATAGTAATTAGACCGGATTAGACATCTGTCAGGGTTTAGGTGTCATCAGGGAAATGATTTTGAAAGATTTCAATTCATGAAACTCCATCCAAATATTAGCATCTGTACCTCTGAAGAGACAGCAGGCTGTTGACTCGAGCATTACGCTTGCTGCTGGAGTTTGTATGCATGTGCTGAAGCGCTATTGACCAATCTGTTAATGTTTGACACGTACATTCCCACTGTGGCAGGATGAGTGTGGTCCGGTTGCCAGGCAGCATGTGGGGTGGACACATCTAGTAGTGTGAAGGAGAGGTTGTGTCTGCTCTTAAAATGTTTCATGGTTGCTGAAGCAAATAATCCAATGGAAATTTGCTGCTACTGCCTCTGATATGTTGTCTAATATTTGGTTTAGAAAGTTTATAATCTGTCTCTTTTGTACCAGCCCATATTTGAAATAGTCTTAACACTGATGGTTTTTTATATTTAGTTTATTTCGGTTCATATTTATTGTATTTCAAGTAATGGAAAAAAGTAAAAGGTATTGGTAATTTTCATCCAGGACCAAATCTGTTAAGTTTAAAACTCAAAGAAATAGGGGTAAACACCAGTGGAAAAATCAATACTGAAAATTCCTAAGTAGATTGGATCCTATTTTTATGGACTTTTCTTAGAGAGTAGTTAGTAATGAAGTGGCATGATTACCAAAGTCAACATGTTAATTAAATGAAGCTTATTAATGATCATGTTTAATATTCTTAAGGGATCTTGTTGCTGACATCCTCTTAACAAGCATAATTAACTTATAATGATGATGTTCTCTTGAGGAAAATGCCAGGATTGAAAAACCGTACCACATGGGCACCACTTTTGCTGAAGACATCCCACATCACTTCCTGTGCCAACGGCTGCTCTCTGGGCATCACAGCTCATCTGACATATGTGAATACTGATCCTGAACCAGTGGAGGGTGTGTTTGTGTATCCTCTGGGGGAGAAGGAGGTTGTGGTGGGTTTTGAGGCAGTGGTGTCCGGCAGGCTGGTCAGTGTGGAACTCCAGAGCCGTGCGGACTGCTGTTTGGACTGCTGCCCTGGATCGGCGCTGCGCACGCAGTGTGGTCACAGCAAGGAATGGGGATGCTGTGGAGGAACAGGTCTGGAGATACAGTGCTCCAACGGTCATCTGTTGCTGGATGAGGACCTGGATAGGAGCACTTTTATTGTGAGCACAGGACAGATTGGACCGCTAGAAATTGTGTCAGTTGTCATCAGTACCACCCTTGAACTTCCTACACTTGAAAATGGTGCAATCCGCCTGGTCTATCCCACAGTGCTCACACCTATAGAGAGGATGCTGGGAGTTGGGCAGCAGTGCACACATGCTCTGTTTACCAGCTCTGCCACAAACCTCTCGCCTTATCAGCTCAACTTCCAGCTGCTGGTTCGAGGAGCCTGTCTGCTGGCCGGTCTGGAAAGCCCCACCCATGCCCTGCGTGCGGACGCTGACCCTAGTGCACAGTCTGCGTCTGCAACCTACATCACCCTGGCCGAGGAGCATCCATGTGACCGACATCTGGAAATAATACTACACCTTAGCGAGCCTCACAGCCCAATGGTCATCCTAGAGAGGGGCCGGCTCACTTTTAGTGAATATGAGCAGCAGATCCGTGCTCGTCGCGATTTCATTCGCTGTGCCCGAACGGAAGCAGAGTCTGAGAAGAGGCTGGAGTTCGTGCGGAGACGATATCATAAGGATCTGCTCTTGAACCCAGTCCTAATGCTTAACTTCTGCCCAGATCTGCTGTCAGAACCAACAGAACTGCAGCAGGCCAGCAGAGAACTCATCTTCCTCATTGACAACAGCAGCACAATGACACAGCACAACATCAACAAGATCAAGAGCACAGTGACTCAGGCATTGGAGTACATCCAGAAGATGCACACAGACCAAGGTGGCGCTAACCTGTGGGGGGCGCTGTCCTGGGTTTATCGGCAGCCCGTCCACCGCAGCTGCCCACGACAGCTCTTCATCATCACGGCCAGAACCTTTAGCAATGTAGGCCGCGTGTTAGAACTGGTCAGGAGGAACACCTGTAATGTCAGACATTTAATTAGTGAAATGGTCCAGATTATTGTCAGGGGAATACTAAACATATTCCCTTTTCTCTCACTCTCAATCAAGCACATTGTCAATCCATTGGAGACAAACATGTGTTTCGGCCTGGGTCTTGGTCCTCAAGCCTGTCGAAGGCTACTGCAGGGCGTTGCCAAGGTTACGGGAGGCAGTATGGAGTTTCTCAGTGAGGAAGAGCGGCTTCAGCCAAAGTTGGTTAAATGTCTAAAGAAAGCTCTGGAACCCGTATTGACGGATGTACGGATTGACTGGTATGTGCCGGATAATGTCGAGGCCCTTCTCTCACCAAATGAAATTCCTCCGCTCTACCCAGGCAGCTGCCTGATTGGCTACTGCACTCTCTATGACGTATCTGGATTCAGGGCCCAGAAAAGTGAGGTGAAGCCTCGTGCATACAGAAGCCACCAACGTGATTCAGCGGGGTCAGTTTTTGAGCTCTCTCCCTCCATTTCCGAGCTCCTTCAGCCTCTGGTTCCCCCAGAGGAGCGCGAGAGAGATGTTGTAAAAGAGTGCGGGGTGGAGGGAGACTTTGAAGAAGCATTGAGGGAAATTTCTCGAGAAATCTCGTCGGAATTTTCCTGCGCACATGCCACCGATAATGCTGTCAGCCCGGGTGGTGACACTGACTACAGCACCAGTGATGTGCGCTGGCGTATTCAACAGGATTCGTATGTTCAGGATCAGTATATGTTGACACACTGTTCTCTGAGCAGTGAGAGGGCCTTCTCGTCTGTTTCTCCCCAAGCAGAGAGTTCTGTGCTGGGCATGGGTTCTCTGCCACATGGCTTGGAGAGAATGGAGCCCACACAGGGTAGAGGCCTCTCGCGCTGGGAAACTCCGTGGACTCAGAACGCCACCTCTTCAGGGGACACAGATTCTGCATCAGGGAAGGGTGACCTGGACATGCACCGCCTGAGGAGGGCACTAGAGAGGGTCTCATTTGAGCAGGCCCTGGGAGGCCGACTGGAGGAGAGTGACACAGACACCCAAAGCACTTCACGAGGAGGTTTATCCCGCCCCAGTCTGACTGACTCCAATGGCCTCCTGTTCCCTGCTTCCCCACTAGACTGGGACAGCTTCACCGATCCTGAATGCCTGTTTTCAGCCGCTCCTCCAGGTGAGTTCCAGGCTCCAGGGGCCCAGTGTCGCTCAGTGATCCATGGCAAGCTGGGAGGACGGCCCTTATCCTGGGAGGTCTATGTGGATCTGTCCCTTTTGTGGGACACCGAGATCTCAGCAACCCTGCCCACCAGCACCGGGGCCTGGGATGAGATTATCCACCAGCTGACCGCACAATCTGTCATCACAGACTTCGAAAACATGGCGGAGAAAGAAACAGATATTGAAGTTGAAAGAGGTCCTTGCAAGCGGTACAGAATGAAAGCGATCCAGACCAGCAAAAGCTGTGGAATTGTCTGCATGTACACAAGCTTCACCACCACAGACACCAATGCACGACGCACAGGTGTGCGGTTTGGGACCAGACACAGTTCTCATTCTGGCAGCAGAAGACAAAAGTTGTGCTCAGTGGGATTTAGACGGCACCCGTCCAGTAGAGGCAGTGAAGAGACAGAAGATACACACACCTCGACAGACAGAGAAGATACACCTGCATCCCCTTGTAGCATGACATCCTGGGATAGCAGCACAGGAGGGAGCATCAGTCCATCAGCAGTGTCGTCTCGCTCTCAGCGCTCTGTGGAGAGCTTCTTCGGCTCCAAGTTCAATCTGGGAAGACTAAAGGGCAATAGTGGAAAACAAGCTCCTCTCAAACCTCACTGTCTCTCTGCAGAGACTGACAGACACATAGAGACAGACACGTCTGACTACTTGCCGTTGGTGCGCCTTCAGTTGGCATCAGGTGCGTTTCTGCTGTCTGAATCATACTCCGAGTGTATCCAGATCCCTCTGGACCGCCTGAAAAGAGCGTCCCCATACCTGAGCCACCGCAGCAGTCTGAGCCCTCCTTTCCATTGTACCTCACCACCTGCCACTGCTTCATCTAGACACATGCGAGAGTTGTGGTCCAACCCTTTGGAGGAGGGGTCTCCAAAATTGGTGGGTGGAGTCCCGCAGGCTGACAGTGGGCGGGGCTCTGAAGCTGACACATGTGAAGGTCCACCGTTGGATCCGGCAGAACCTCATGGAGAGAAACTGGAGCAGATGGATGTAGAAAGCTCTAGTTGGGCCACGGCAGTAGCTCTGGCCTGGCTGGAGCACCGCTGCGCTGGGTTCTTTGTGGAGTGGGAACTGGTGGCTGCCAAGGCAGATTTCTGGCTGAAGTGTCAATCGCTAACAGAGGGTGTCGACCTGGTAGGGTTGAGGGCAGCAGCCAGGCAGCTTTTTCTACTGTTGCGTCACTGGGATGAAAATATCAAACTGAACGTGCTTTGCTACAACCCCAATAACATGTGAGGAGCTGACCTCAGATGAAGTTCTTGGGTCTTTAATTGAATTTAACCCAGGACTCACAATTCAACTTTATAAGCAGAATAGAATTAATCGAAGTTGTCCTTCAAAAAGGAATGGAGATAAAGCTGAATTGTGAGTTGGGTTTCAGTTTCTCTCATGCCCAGACCACAATACTGTACAAGCTTTGCCTTAATCTATGGGCTTCAGTTTAATTATGCAGTAGAATGTAGTTCACTGTTATCAACTGCAGGTCTGACAGCACTTTATGCTAGCAATAGCAAAATGACTAGTATTGGATGCTTCATAAAACCAATCACAAGCATAAAGACCAGGCCAAAATGACACATTCTTGCCTTAATTAACACTACCGTTCAAAAGTTTGGAGTCAGTAATTTAAAAAAAAAGAAAAAGTAATAATACTTTTAATCAGCAAGGATGCATTAAATTGATCAAAAGTGATGGTAAAAACATTTACAATGTTACAAAATGTTTATTTTATTTTCAATCCTGAAAACAATCAGTTTCCACACAAATATGAAGCAGCACAACTGTTTTCAATATTGATTATAATAAGAAATGTTTCTTAAGCACCAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATTCTTCTTTGCCATCACAGGAATAAATTATATTGTATTTTTGATCAAATTAATGCAGTCTTGGTGAACATAAGAGACTTCCCAAATTTTGAATGGTAGTGTACTTGCTTGAATTTAATTAAACTATTTTTTTATTTTTATTCTTTGTCAAGTTTTAGACTAAACTGGACCATTTTAAACCATCTTTTTCTTGCAATGACTGATTCTGTCACTATTACACAGTTTTGGGGCTGTTAACCATAGGAACAGTGTAAGAACATTGGTAAATTCCATTTTCCAATGTTTTTTTTTGGGGGGGGCTGCTTGCTTTTAGCCTCCTTGATATATTTTGAATTTAAGCATTTAGTTCTTCTAAAGTTTGCATAAAAGCAAGAGTTTTCAGGTAACACCACACCACATAAACAATGTGCAAACCATGGGGCTATATTTGTTACATGTGCAAAAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000152_01917798_01946700.mRNA True 6176 mRNA 0.46 21 1916703 1948064

Neighbor

gene id symbol gene type direction distance location
CI01000152_01905400_01907934 MUL1A coding downstream 8769 1903703 ~ 1907934 (-)
CI01000152_01892421_01893463 CAMK2N2, CAMK2N1A coding downstream 22837 1890149 ~ 1893866 (-)
CI01000152_01770267_01784486 NCAPD2 coding downstream 132217 1770091 ~ 1784486 (-)
CI01000152_01763662_01769747 ACSM3 coding downstream 146956 1763289 ~ 1769747 (-)
CI01000152_01755247_01760266 MAP6D1 coding downstream 156028 1755130 ~ 1760675 (-)
CI01000152_01999033_01999195 NA coding upstream 50719 1998783 ~ 1999195 (-)
CI01000152_02006897_02010593 EIF4E2 coding upstream 58288 2006352 ~ 2010593 (-)
CI01000152_02015257_02024292 CAPN10 coding upstream 67193 2015257 ~ 2024292 (-)
CI01000152_02066678_02068178 NA coding upstream 118366 2066430 ~ 2068284 (-)
CI01000152_02086974_02089993 NA coding upstream 138424 2086488 ~ 2090050 (-)
G359318 NA non-coding downstream 32761 1883554 ~ 1883942 (-)
G359315 NA non-coding downstream 33323 1882977 ~ 1883380 (-)
G359289 NA non-coding downstream 227132 1689031 ~ 1689571 (-)
G359281 NA non-coding downstream 244464 1671574 ~ 1672239 (-)
G359429 NA non-coding upstream 4948 1953012 ~ 1954853 (-)
G359372 NA non-coding upstream 98318 2046382 ~ 2059154 (-)
G359709 NA non-coding upstream 212288 2160352 ~ 2175594 (-)
G359178 NA other downstream 572698 1337660 ~ 1344005 (-)
CI01000152_00562189_00571618 CREMA other downstream 1351419 560484 ~ 572648 (-)
G359788 NA other upstream 370204 2318268 ~ 2318734 (-)
G359800 NA other upstream 420928 2368992 ~ 2459836 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016795 vwa5b2 coding NC_007113.7 CM002886.2 44984509 ~ 45027754 (-)
bowfin (Amia calva) AMCG00009567 NA coding CM030126.1 CM030126.1 41684512 ~ 41700757 (-)