CI01000179_00597117_00615140 (GPIB, GPI, GPIA)


Basic Information

Item Value
gene id CI01000179_00597117_00615140
gene name GPIB, GPI, GPIA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000179
NCBI id null
chromosome length 1240921
location 597117 ~ 615417 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000179_00597117_00615140.mRNA
CAGCTTTGGACCGAAAAACAGCGGGATCTTTTCATCATGGGGCTCAGCAGCGATCCGATCTACCGCAAACTGGAACAATGGTACAAATCCAACGCAGGAAACCTCAACATGAGGGAGATGTTCGAGGCCGATCCTGACAGATTCAACAAGTTCAGTCTGGAGCTGGCAACAGATGATGGAGACATTCTGCTGGATTACTCCAAGAATCTCATCAGTGAAGAAGTCCTGACAATGCTCTTCGACATGGCACGATCATTGGGTGTTGAAGCCGCCAGAGAGAAGATGTTTGCAGGAGAGAAGATCAACTTCACTGAGGGTCGTGCTGTTCTCCACACCGCCCTGAGGAACCGTTCCAACACTCCCATCGTGGTGGACGGTACAGATGTGATGCCGGAGGTGAACAGAGTCCTGGAGCAGATGAAGGGCTTTTGCCATAAAGTGCGCAGTGGTGAGTGGAAAGGCTTCAGTGGTAAAGCCATCACTGATGTAGTGAACATCGGCATTGGAGGTTCTGACTTGGGTCCTCTGATGGTGACTGAAGCTCTGAAGCCGTACTCTAAAGGAGGACCCAATGTGTGGTTCGTCTCTAATATTGACGGGACGCACATGGCCAAGACCCTCGCCCAGCTTAACGCTGAGACCACCCTCTTCATCATCGCTTCAAAGACATTCACCACCCAGGAGACCATCACTAACGCTGAGACGGCCAGAGAATGGTTCCTTAAGAGCGCTAAAGATACATCGGCTGTGGCCAAACATTTTGTGGCTCTTTCCACAAATGCACCGAAAGTCAAGGACTTTGGTATCGACACCAACAACATGTTTGAGTTTTGGGATTGGGTCGGCGGGCGCTACTCACTGTGGTCGGCTATCGGTTTGTCCATTGCACTGCACATAGGTTTCGACAATTTTGAGCAACTTTTAGCTGGTGCTCACTGGATGGATAACCACTTCCGCTCGGCCCCTCTGGAGAAGAACGCTCCAGTCTTGCTGGCCCTGCTCGGCGTCTGGTACGTCAACTTCTTCCAGGCCGAAACACATGCTCTGCTGCCCTATGACCAGTACATGCACCGCTTCGCTGCGTACTTCCAACAGGGAGACATGGAGTCCAACGGGAAGTACATCACCAAGTCTGGCACTCGTGTGAATTACCACACTGGACCCATCGTGTGGGGAGAACCAGGAACCAACGGACAGCATGCATTCTACCAGCTCATTCACCAGGGCACTCGCTTGATTCCCGCTGACTTCCTCATTCCTGCTCAGAGCCAGCATCCTATCAGAGATAATCTGCATCATAAGATCCTGATGGCGAACTTCCTGGCGCAGACAGAGGCTCTGATGAGGGGAAAGACCTCTGATGAGGCCAAGAAAGAGCTCCAGGGTGCTGGGATGTCTGGGGATGCACTGGAGAAACTCTTGCCCCATAAAGTTTTCCAAGGAAACAAGCCAAGCAACTCTATCATCTTTAAAAAACTTTCACCCTTCATGCTTGGTGCGCTGGTTGACCCTATGCTCATGGTATGCTGTATTTGTTCATGTGTTTCAGCCATGTATGAACACAAGATCTTTGTGCAAGGTGTGATGTGGGATATCAACAGCTATGATCAGTGGGGAGTGGAGCTCGGCAAGCAACTCGCCAAGAAGATCGAGCCTGAGCTGCAGGACGACGCAGAGGTTCATTCCCACGACTCTTCCACCAATGGACTCATCAGCTTCTTCAAGAAGAACCGCTCTTAAATGTTTCCTGACTCCTCGGCTTTAACCCCACCTCTGCTGCCCCCTCATCCAATGAGATTAGTGAATTATGTTTTAACGCTTGGCATAGTTCAGATGGTAAGCCTAGACAAGGAGGATGAGCACTTTATGTCTGTCATTATCTATAAGCCATGAGATTGTGTGTTGTGTAAGATTTGACTGTATTCATGTATCTGTGGACCAGTATGAGACGACTGTATCCGTATGCACTGCACATACTAGATGGATTTCATCTTCTCCTTTGGACCAGCGAACCACA

Function

symbol description
gpib Predicted to enable glucose-6-phosphate isomerase activity and monosaccharide binding activity. Predicted to be involved in gluconeogenesis; glucose 6-phosphate metabolic process; and glycolytic process. Predicted to be located in extracellular space. Predicted to be active in cytosol. Is expressed in several structures, including blastoderm; blastomere; head; heart; and yolk syncytial layer. Human ortholog(s) of this gene implicated in congenital hemolytic anemia; congenital nonspherocytic hemolytic anemia; intellectual disability; and neuromuscular disease. Orthologous to human GPI (glucose-6-phosphate isomerase).
gpia Predicted to enable glucose-6-phosphate isomerase activity and monosaccharide binding activity. Predicted to be involved in gluconeogenesis; glucose 6-phosphate metabolic process; and glycolytic process. Predicted to be located in extracellular space. Predicted to be active in cytosol. Is expressed in several structures, including cardiovascular system; digestive system; musculature system; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in congenital hemolytic anemia; congenital nonspherocytic hemolytic anemia; intellectual disability; and neuromuscular disease. Orthologous to human GPI (glucose-6-phosphate isomerase).
gpi Enables glucose-6-phosphate isomerase activity and ubiquitin protein ligase binding activity. Involved in glucose 6-phosphate metabolic process; positive regulation of endothelial cell migration; and positive regulation of immunoglobulin production. Located in cytosol; nucleoplasm; and plasma membrane. Implicated in congenital hemolytic anemia; congenital nonspherocytic hemolytic anemia; intellectual disability; and neuromuscular disease. Biomarker of acute lymphoblastic leukemia and acute myeloid leukemia.

GO:

id name namespace
GO:0004347 glucose-6-phosphate isomerase activity molecular_function

KEGG:

id description
K01810 GPI, pgi; glucose-6-phosphate isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000179_00597117_00615140.mRNA True 2017 mRNA 0.50 18 597117 615417

Neighbor

gene id symbol gene type direction distance location
CI01000179_00540967_00543017 NA coding upstream 54011 539916 ~ 543106 (+)
CI01000179_00484287_00485067 NA coding upstream 111424 484287 ~ 485693 (+)
CI01000179_00425808_00426689 NA coding upstream 170407 425449 ~ 426710 (+)
CI01000179_00417453_00419193 NA coding upstream 177818 417387 ~ 419299 (+)
CI01000179_00328857_00339679 LSM14AA coding upstream 256351 328563 ~ 340766 (+)
CI01000179_00618398_00629398 NA coding downstream 2981 618398 ~ 629565 (+)
CI01000179_00717010_00737683 RPGRIP1L coding downstream 101444 716861 ~ 737683 (+)
CI01000179_00954762_00957467 IRX5B coding downstream 338538 953955 ~ 958281 (+)
CI01000179_01050408_01052303 NA coding downstream 434647 1050064 ~ 1052303 (+)
CI01000179_01066483_01071659 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding downstream 451066 1066483 ~ 1072041 (+)
G374838 NA non-coding upstream 9629 587164 ~ 587488 (+)
G374836 NA non-coding upstream 12525 584232 ~ 584592 (+)
G374835 NA non-coding upstream 12992 583708 ~ 584125 (+)
G374817 NA non-coding upstream 28313 563526 ~ 568804 (+)
G374809 NA non-coding upstream 59885 412005 ~ 537232 (+)
G374868 NA non-coding downstream 96228 711645 ~ 721403 (+)
G374870 NA non-coding downstream 97656 713073 ~ 713610 (+)
G374882 NA non-coding downstream 144807 760224 ~ 760624 (+)
G375076 NA non-coding downstream 152591 768008 ~ 768281 (+)
G375082 NA non-coding downstream 163062 778479 ~ 779171 (+)
G375230 NA other downstream 459545 1099706 ~ 1100159 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00020659 gpib,LOC108428767,LOC100196524,LOC103130839 coding CM030127.1 CM030127.1 28250873 ~ 28265191 (-)