CI01000185_00169413_00191110


Basic Information

Item Value
gene id CI01000185_00169413_00191110
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000185
NCBI id null
chromosome length 228139
location 169345 ~ 191591 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000185_00169413_00191110.mRNA
CTATAATAACCTTGGCCTAGATAACAGTTCTGATGTGCATTGAAAAGTTTTATAAAACATTGTTTGAGATGTCGCCTTTTACATCGGTTATTAGTTTCTTCCTGGTGTTCAATGTCAACATAAATCTGAGGATTGTGGGTAATTGGATCTGTGTTAATACAGTAAACTCAGATCAAACAGCAGCACTGCAGAAGGACGGCTGTATAGATTTCATGGAGTACGTCGCTGCTCTGAGTTTGGTTCTGAAGGGCGGCGTTCAGCAGAAGCTGCGCTGGTACTTCAAACTTTTCGACATGGACGGCAGCGGATGCATCGACCGTGACGAGCTGCTGCTGATCTTCAAGGCCGTTCAAGCCATTAACGGATTAGAGCAGGAGATTTCTGCTGAGGACTTGGCTGACATGGTGTTTAACAAGATTGATGTTAATGGAGACGGCGAGCTGTCTCTGGATGAGTTCATGGAGGGCATCGAGGCGGACGAGGTTCTCACTGTGATGTTGACCCAGAGCTTGGATCTGACTCATATCGTCAGTAATATCCACAGCGAGACTGACTCTGAACAGCAGCCCCCAAAACCAACAGAGGCCTTTGACTTGCGAGAGCCGCTCCTCAAGAAAGCCAGAGCTGGCTCAGCACCTGGTCTGAGTGGTACCACCTATAACATCTACAAACGCTGCCCTCATCTTCTCCGAAGGTTGTGGAGAATACTCAAATTTATCTGGAGGAGAGGCAAAGTGTCCAAGCAATTGAGCGTGGAAGCAAAGCGCTTAATTGAATACTTCTTGAGGAACAATTACAGTGACATCTCTGTCCAAAACGGAGCCATCCCAAAGGTACCAGGCTGCTTGGAGCATACAGGAGTCATCACACAGCTGCTGAGGGAGGCCAGAGAAACCAAGGGAAACTTAGTGGTGCTGTGGTTAGATTTGGTAAATGCCTATGGCTCGATTCCCCACAAAGTTGTTGAGAGTGCTCTGCAGAGGCACCGTGTTCCTGAAGGCATCAGAAAGCTCATAATGGACTATTACAACAACTTCCACCTGAGAGTCTCAACAGGACCAATAACCTTGGACTGGTGCAGCCTGGCAATAAACATGTTTGTCAAATCTGTAGAGCCAGATTGTCTAGGCCCAAAATCAAGATCCGGAATCTGCCAACCACCCATAAGAGCCTTTATGGATGACTTGATGATTACAACAGAGTCAGTACCAGGTGCCAGGTGGATACTGAAGGGGCTGGAAAGGCTGATGGGGAGGGCAAGGATATCCTTCAAGTTCAAGGTAATGATTGGAGGATGGAAGCAAGAGCAGAGTATGAGGAACTCAGGAGTGACTGCCAAAGAAAAGGTTGGAGAGCCAAGTGTTGGCCTGTGGAGGTTGGGTGTCAGGGCTGTGCAGGGCATACAGGGCACTTGGTATCATGAGAGAGACGGTGACGATGAGAGAGTTGGCCATGCAAAGGAGCTCCTCACCAGATTTCTGATCAGGGAATCAGAAGAGCAGCCCAAGAACCAAGGAACACTCGGAAAGGACCATGCACGATCACCACAGAAAGCTCCATTATTGAAGATGGTGTTTCCAGTTGAACTCTTCCCAACTCCAGTTCTTCCCAGCAGCACAATCCTCAGATCATCTGCTCTCTTTCTTGCATCTAAAGATCAAATAAAAATTAAAAACATTATATTGAATTTTAAGTGAAAATTGTCAACAATATTTAGAGAGAGTAGACTCAGTTCAGCTCCTTAAACAACAACAACAAAAAAATATTATATTGTAAAATATTAGATTGCAATACGTTATTTTATCTATTGAGGGCTACTTGCAATAGTTTATGACTTACTGTTTTGGTGAATGCACTCTGAAATTTGTTCTTTTGTACTGACTGTAAAAAGAAAGTATGGATCTATTACAACATAACACCCAAAACTGACAATTATATCATCATATACCCACATGTTGATACAAACACTTATAATTGTCTTTTTTCCTACTGAATACAAAATGGGATTTTTAGCACAAAGTTCAGGCTGCTTTTTCACGATACAAATGTGGATAGTGATTTTACTATGAAGCATCAAAAAGGAGAAACACCACAAAAAATGTACCATGACAGTACCATAAAAGTAGTTCACATGCTTTACTGTAAGTTATCTAAAACATACCATAGCTTTGTATAAAA

Function

NR:

description
polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000185_00169413_00191110.mRNA True 2178 mRNA 0.43 11 169345 191591

Neighbor

gene id symbol gene type direction distance location
CI01000185_00094838_00105224 NA coding upstream 64035 94838 ~ 105310 (+)
CI01000185_00046321_00083402 NA coding upstream 85943 46321 ~ 83402 (+)
CI01000185_00026193_00042023 NA coding upstream 127259 26193 ~ 42086 (+)
CI01000185_00000012_00003634 NA coding upstream 164973 12 ~ 4372 (+)
CI01000185_00217764_00226365 NA coding downstream 25972 217563 ~ 227216 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019932 guca1e coding NC_007133.7 CM002906.2 1092479 ~ 1109547 (+)
bowfin (Amia calva) AMCG00012659 guca1a coding CM030125.1 CM030125.1 3177398 ~ 3181902 (+)