XLOC_019932 (guca1e)


Basic Information

Item Value
gene id XLOC_019932
gene name guca1e
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1092479 ~ 1109547 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039765
tagatgtatggatagatggatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatgtatagatagatagatgtatagatagatagatgtatagatagatagatgtatgtatagatagatagatggatagatagatgtatgtatagatggatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataaagcagTGAGTCAGTCTGGTAGAGGAGACAGAGGTCGTGATCTGGGGTCAGTGGGTCAGGTCTGCACTCGGCTTGATTCTCTGTAAGCAGCAGGTAATTCACTGTAATTTCCAGAGCGGAAAGTTCAGCCCTGAGGGTGACGTCAGTGCTAATTGGCCGGGACAGAGGCTCGTCCTGTCCCGCCGAGTGCCGTCCCGCTGgctgatctgatctgatctgcAGTGTGAGAGCGAGCCGTGCACCGTCCTGACGCTCCTCAGCATGGGGAACTCCTCCAGCATGTCCGCCACCGAGCTCAGCGCCTGCAAATGCCACCAGTGGTACCGCAAGTTCATGACCGAGTGTCCGTCCGGCCAGCTCACCTTCTACGAGTTCAAGAAGTTCTTCGGCCTCAAGAATCTGTCCGAGAAATCGAACGCATACGTCAATACCATGTTCAAGACCTTCGACATTGACGACgATGGCTGTATTGATTTCATGGAGTATGTGGCAGCTCTGAGTCTGGTCCTGAAAGGCGGTGTTCAGCAGAAGCTGCGCTGGTATTTCAAGCTCTTCGATATGGACGGCAGCGGCTGTATCGACAAGGACGAACTGCTGCTCATCTTCAAGgcgGTTCAAGCCATTAATGGAGCCGAGCCGGAGATCTCTGCAGAGGACTTGGCTGATATGGTGTTTAACAAGATTGATGTTAATGGAGACGgcgAGTTGTCTCTGGAAGAGTTCATGGAGGGCATCTCGGCGGATGAGAAGATCTCAGAGATGCTGACCCAGAGTTTGGATCTGACCCGGATCGTGAGCAACATCTACAACGACTCCTACATCGAGCAGGAGGCCGAGATCATCGAGGATCAAGCATGACAACACTGAGAGTCTGGAGCGGACGCTTTTATTGGCTCCTTCCCAGAGTAGCGAGTGCCGAGTGTAAAACATAGATCGGCCAAAGCTCTGGGTCTGTGCACTAGATTATATCATCTGAACGCACAAAATGCTCCAGTACTGTGAGTGTGTAGTTCAGCCTGAGGGTGGCGCTCTAACACTGACACACAGGCTGTAAGTACACACCACACATGCGTAGAACGCTTCTAGAAATGCCTTAATGTAGAGTTTAATGCCTCTGAATGCTGATTTAGAGTTTTGAACAAGCGTAGGAAATCTTGGtcgcactttattttaatgtacaattcacgcTAACAACAAACCATTCACTAAGAATATAGCTCAATACACTACTGATTAGCTGCTTAATAATAGTTAGTAGGTTAGTAGTTGGGTATTGGGTTGGATTAGAGATGTAGGATATGATCAAACATGCTAATATCTCCTAATAATGCTAAGCCAGTCATAAATgctgtgaattgttacttaaacttaGTGTTACTAAATACTTATTTGCATTATATGTGAGCATATGTAaagatgtatatatttttattaatctactACGTTGTTAAGGAAGTAGCAATTACTGAAGAAGATGACGAATCGAGTCAGAGCGGTTTACGAGGTAATGTGAAGAAAGCAGAGCAGTCTGCAGTTCCGTTTTTCGCCACCGATTTACACTGTAGTTTTATGGGGGCGCTGTTGAGCTCAGTGCTTAGCCTCacttaaagggccagttcacccaaaaatgataataTTCTCATCATTTCTTCACTCTTTACAGGTTTAAAcctgtttaactttatttattctgttaaactcAAAGGAACATATACTGAAAAAGctggaaacctttaaccattgacattcatagtatttTATTTCGGTTTTCCTACTACTAAGTGCTTTTCACTTTcctcaaaaaacaaaactgaagaaagaaactcacacattttttaaacaaaatcacaGCAGTTTTCTGAACATATGAACCGAATTTTccaatatatatttcttttattgcttaaatcaggggtgcccaaacttcttcgtatgaagggccaaaaaccgaATATCATTGAGAGTCGCGGGCTGAAGATGGCCATTGggaatttcctaatttatttcagaatatttcaaaataaatagaaaacattacataaaatcatattaaataatgctggataacattttaaatgataaattatttcaataaaaacaaTCAGATTTATAACAGGGCTGCTGCAGTGAATcgattaaattgataaaaatcgattactaaaagcgttggcaaTGAATTTCATAATCGATTTGTTGTGTCGCGTGACACGGGTATGGTTGATTATTAAAAAGCACTTCAGTTGAAAGGAGTTCAACAGCAGGAGCctacttttgttctgttttgaagtgagggccgtaaagtccctggtgctgaTGTTTCACTCGTTATCCAGCTTGTCAAGCATGACAAGTTAGCATTAACTCATTTACTTTTAGagcggaaataaaaaaaatgaacctGAGTTTGGCGCGGTGTCTGGCGCTGggcagagctctcagtaagggaccgtctgaaaagtgcttctttatttttttttcccccaaaaacaaaaccaacttaaccccgctgagaaagacgtgtcatattatcacaattatgcagcgttttaaccgcctaatgcttattttatgttttagacatgtaaactcacagacttactagtaaaacaaaacatttagagtttgtaaaacacacaaggaagtctaacaatccattcaaatataatttgctgatgtgatttattcatatcagatacacattacacatagTGAACGTAACTTTAAAGCTGAATCTACTCTTCTCTAAGGTCACCAGCCACTTACTTGCATGTGTTTAGGCGGTAACTGGTGAATTTACCGCCGTATTCTGCTTTTATGAATGAGGAGAACTGGTATGTGAACTGGTAAAACTTCTGCTTTTGTCTTTTCGGTTagaaattaatgctttttttattcgATTCATCgaaaaaaaatctagattaatcaattataaaaataatgattagttgcagccctaatttaTAACACAGCGGAGTTcagtgctgaatacactagtcaagcagaatctgcctttgacttaaTTTGCTCACCAAACTCTCTGCATTGTCGGGTGACGGTATttgcatttaaactaaatctgatttacttacaccatttaattgacaCTGGTAATTTCagctagcttttaacaataaaacaaacaaacaaacaaacggttgcattaaatgtgaataaatgtcgataccatccccatcattctcatcactcttctcagatgggatggtgggccaaatcaaaggttatcatgggccaactttgggccctagtttgagcatctctggtttaaatagactataaaaaaacaaatatatgtactgcaatattgaaGACATTTAGAGATGAATTCTTGAGTTAATATAGAGCTCTATGTCTTGTCTAAGGGATAAATATTCTGATATATTTTCTTAAGACTTGCAAAATGCCAAATGTGAGTATAAATCTGCAGTGGTGAATCTGAAAGAGCGTGCCGTTAATGAGCAGTTAGCGGTGCGCTTTCTGTAATGATGCCTGTGAATGCTGATTTAGCATGATCTCCCAAATGCACAGACTGCACTGTAATGATAAGCATGCTGAAGTGGTGAAGTTGCGAGTGGCTCATGATGAGCATTTATATACAGGCTGCGAATTAAACAGTAAATTGTATTGAATTATGCATCGGGGAAGGGGTTCGCTTTTCTTAAACGTACTCTGTGATGATAGATTGTCTAATACATGCTGCAGTGAatcaaatgtatgtttttaaataaattacatctaATTCATGAATAAAACGTATTTAAGTTTTCAGCGTTTTAAAGGATATTTAGTGTATTTTGACCTGCAGTAACatctgattagctatttcagagGCTACTGTTGGTCAAACTACAAACTATGCGTCTaatattactttacttttacGCGATATTTAGAAACAAGCACATATTTTATGAGAAAAGTAACTTGTGAACACTTCTGATGTCCATCGGGGCTCTGAATTTTCCGTTTTCTGCATATTTCCCCACATGGACTGATTGATTAGTGTGATTATTCACTCACAATGGTTTgcaccattataggggtggtcaaatgtacatttattttaattattaatatttttatttaaaatacagatcagagaaAACAATTTCTCACTGTATTAAAGGCCTGACCCCTatatacatcttgttttgatttcTTCAGtggggatcaagcattaattatgacttaattagggttaaacaaccccccccccccccaaaccctcctgtaattcacaccctgaCATTACCATGTCTCAAGAGTTGTAGTTTAGTAAATCTGCTGTGGACAATAAGAATTAATCTCAGAAGATCCGTTCATCTGTGGTTTTCCACCAGCATGTCAGCTCCGGTTTAACATTGGAAAGCAAAGAAATATTAATACTTGTTAGTTTGTCATTTTGAACTCTTTCTCCACCATTGAGCAGAGAACTCGTCTATTAGGAGAAACTGAAGAGTTTTAGGTGTGTTAGGTGCATTGCAGTATAGGAATCCCTAATGCAGGTCCTGAATCATTTACTATATACTTCAGTCTGTGTCTGCTGGGTGTGAAATAGAAGATAATCTGACAAAGTGAAAGCACATTTgcttaacattaacattaagaGAGTGATGAAACTATACTTTGGCGTACTTGCATCtttatgcatatatatgtatatatatatatatgtgtgtttgtgtgtgtgtgtgttcatatgtttgtgtgtctgtttgcttgtgtttgcatgtgtgtgtgttatatatgttGAAAATGCACTACTTTGGAAAAAAATTCCCTTTGTTTGTCAAAGATGTTGCATTTGTGATGAAATCTGTCTGAAATCAAGTGGTGATAAaacatgaacacatgaagataaaataaaatgctgttttgATTAAAAGCAGAGGCTTGCT
>TCONS_00039766
gATGGCTGTATTGATTTCATGGAGTATGTGGCAGCTCTGAGTCTGGTCCTGAAAGGCGGTGTTCAGCAGAAGCTGCGCTGGTATTTCAAGCTCTTCGATATGGACGGCAGCGGCTGTATCGACAAGGACGAACTGCTGCTCATCTTCAAGgcgGTTCAAGCCATTAATGGAGCCGAGCCGGAGATCTCTGCAGAGGACTTGGCTGATATGGTGTTTAACAAGATTGATGTTAATGGAGACGgcgAGTTGTCTCTGGAAGAGTTCATGGAGGGCATCTCGGCGGATGAGAAGATCTCAGAGATGCTGACCCAGAGTTTGGATCTGACCCGGATCGTGAGCAACATCTACAACGACTCCTACATCGAGCAGGAGGCCGAGATCATCGAGGATCAAGCATGACAACACTGAGAGTCTGGAGCGGACGCTTTTATTGGCTCCTTCCCAGAGTAGCGAGTGCCGAGTGTAAAACATAGATCGGCCAAAGCTCTGGGTCTGTGCACTAGATTATATCATCTGAACGCACAAAATGCTCCAGTACTGTGAGTGTGTAGTTCAGCCTGAGGGTGGCGCTCTAACACTGACACACAGGCTGTAAGTACACACCACACATGCGTAGAACGCTTCTAGAAATGCCTTAATGTAGAGTTTAATGCCTCTGAATGCTGATTTAGAGTTTTGAACAAGCGTAGGAAATCTTGGtcgcactttattttaatgtacaattcacgcTAACAACAAACCATTCACTAAGAATATAGCTCAATACACTACTGATTAGCTGCTTAATAATAGTTAGTAGGTTAGTAGTTGGGTATTGGGTTGGATTAGAGATGTAGGATATGATCAAACATGCTAATATCTCCTAATAATGCTAAGCCAGTCATAAATgctgtgaattgttacttaaacttaGTGTTACTAAATACTTATTTGCATTATATGTGAGCATATGTAaagatgtatatatttttattaatctactACGTTGTTAAGGAAGTAGCAATTACTGAAGAAGATGACGAATCGAGTCAGAGCGGTTTACGAGGTAATGTGAAGAAAGCAGAGCAGTCTGCAGTTCCGTTTTTCGCCACCGATTTACACTGTAGTTTTATGGGGGCGCTGTTGAGCTCAGTGCTTAGCCTCacttaaagggccagttcacccaaaaatgataataTTCTCATCATTTCTTCACTCTTTACAGGTTTAAAcctgtttaactttatttattctgttaaactcAAAGGAACATATACTGAAAAAGctggaaacctttaaccattgacattcatagtatttTATTTCGGTTTTCCTACTACTAAGTGCTTTTCACTTTcctcaaaaaacaaaactgaagaaagaaactcacacattttttaaacaaaatcacaGCAGTTTTCTGAACATATGAACCGAATTTTccaatatatatttcttttattgcttaaatcaggggtgcccaaacttcttcgtatgaagggccaaaaaccgaATATCATTGAGAGTCGCGGGCTGAAGATGGCCATTGggaatttcctaatttatttcagaatatttcaaaataaatagaaaacattacataaaatcatattaaataatgctggataacattttaaatgataaattatttcaataaaaacaaTCAGATTTATAACAGGGCTGCTGCAGTGAATcgattaaattgataaaaatcgattactaaaagcgttggcaaTGAATTTCATAATCGATTTGTTGTGTCGCGTGACACGGGTATGGTTGATTATTAAAAAGCACTTCAGTTGAAAGGAGTTCAACAGCAGGAGCctacttttgttctgttttgaagtgagggccgtaaagtccctggtgctgaTGTTTCACTCGTTATCCAGCTTGTCAAGCATGACAAGTTAGCATTAACTCATTTACTTTTAGagcggaaataaaaaaaatgaacctGAGTTTGGCGCGGTGTCTGGCGCTGggcagagctctcagtaagggaccgtctgaaaagtgcttctttatttttttttcccccaaaaacaaaaccaacttaaccccgctgagaaagacgtgtcatattatcacaattatgcagcgttttaaccgcctaatgcttattttatgttttagacatgtaaactcacagacttactagtaaaacaaaacatttagagtttgtaaaacacacaaggaagtctaacaatccattcaaatataatttgctgatgtgatttattcatatcagatacacattacacatagTGAACGTAACTTTAAAGCTGAATCTACTCTTCTCTAAGGTCACCAGCCACTTACTTGCATGTGTTTAGGCGGTAACTGGTGAATTTACCGCCGTATTCTGCTTTTATGAATGAGGAGAACTGGTATGTGAACTGGTAAAACTTCTGCTTTTGTCTTTTCGGTTagaaattaatgctttttttattcgATTCATCgaaaaaaaatctagattaatcaattataaaaataatgattagttgcagccctaatttaTAACACAGCGGAGTTcagtgctgaatacactagtcaagcagaatctgcctttgacttaaTTTGCTCACCAAACTCTCTGCATTGTCGGGTGACGGTATttgcatttaaactaaatctgatttacttacaccatttaattgacaCTGGTAATTTCagctagcttttaacaataaaacaaacaaacaaa

Function

symbol description
guca1e Enables calcium sensitive guanylate cyclase activator activity; identical protein binding activity; and metal ion binding activity. Predicted to act upstream of or within visual perception. Predicted to be located in photoreceptor outer segment. Is expressed in eye and retina. Human ortholog(s) of this gene implicated in cone-rod dystrophy 14. Orthologous to human GUCA1A (guanylate cyclase activator 1A).

GO:

id name namespace
GO:0007601 visual perception biological_process
GO:0001750 photoreceptor outer segment cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0008198 ferrous iron binding molecular_function
GO:0042802 identical protein binding molecular_function
GO:0030250 guanylate cyclase activator activity molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1577 Enables calcium sensitive guanylate cyclase activator activity; identical protein binding activity; and metal ion binding activity. Predicted to act upstream of or within visual perception. Predicted to be located in photoreceptor outer segment. Is expressed in eye and retina. Human ortholog(s) of this gene implicated in cone-rod dystrophy 14. Orthologous to human GUCA1A (guanylate cyclase activator 1A).

Ensembl:

ensembl_id ENSDARG00000101567

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039765 False 5202 mRNA 0.38 4 1092479 1109547
TCONS_00039766 True 2689 mRNA 0.38 3 1102165 1107779

Neighbor

gene id symbol gene type direction distance location
XLOC_019931 camk1ga coding upstream 23072 1049367 ~ 1069407 (+)
XLOC_019930 si:ch73-352p18.4 coding upstream 49723 1028724 ~ 1042756 (+)
XLOC_019929 pparda coding upstream 73327 997838 ~ 1019152 (+)
XLOC_019928 def6b coding upstream 95958 978867 ~ 996521 (+)
XLOC_019927 NA coding upstream 153652 923511 ~ 938827 (+)
XLOC_019933 si:ch1073-181h11.1 coding downstream 1308 1110855 ~ 1120875 (+)
XLOC_019934 si:ch1073-181h11.2 coding downstream 13563 1123110 ~ 1130263 (+)
XLOC_019935 GUCA1A coding downstream 28450 1137997 ~ 1146989 (+)
XLOC_019936 irf6 coding downstream 60747 1170294 ~ 1182165 (+)
XLOC_019937 eps8l3a coding downstream 77319 1186866 ~ 1203405 (+)
XLOC_019924 NA non-coding upstream 274852 811600 ~ 817627 (+)
XLOC_019910 NA non-coding upstream 783275 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 805290 219167 ~ 287189 (+)
XLOC_019903 NA non-coding upstream 1035739 53914 ~ 56740 (+)
XLOC_019938 CU570769.1 non-coding downstream 140241 1249788 ~ 1267820 (+)
XLOC_019944 NA non-coding downstream 207205 1316752 ~ 1364861 (+)
XLOC_019947 BX322657.1 non-coding downstream 267784 1377331 ~ 1384069 (+)
XLOC_019963 AL954741.1 non-coding downstream 467316 1576863 ~ 1577746 (+)
XLOC_019970 BX649416.2 non-coding downstream 540581 1650128 ~ 1653938 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000185_00169413_00191110 NA coding CI01000185 null 169345 ~ 191591 (+)