XLOC_019924


Basic Information

Item Value
gene id XLOC_019924
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 811600 ~ 817627 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042007
CGTAGCTTCAGTCATTCAAAAATTAACGGTCATTTCTTTCCGTCTTACTGACTAACGTCAGTTTCTCGATCTTGTTAATGGATAATGACTGATATTTGTGATTTCGAGTAGTTCTGACACGCTTAACATGACGTTGAATCTACACGGATCAAGAGAGAAAGGTTTTGTGTCCTGGTTGCCCGTCAGATGTGCGGGAATCATCGGTGTTTTGCTGCTGCTGCGACGTGGCGCTCAATGCAGGATGCAGATCTAGCGCTACTACGTCGAAGGCCcgcctcatgaatattaatgacgtAACGGGACGCTCGCGCTGCTTGATTGGCTCGAACGGAGGCGTTTTTAGAACGTGAATAAATAGTGTGTTACTTCATTGGAAGCGTCGTGCAAATAAAGTGTTAATATTCATGAGCTCAGCCTTCGCCGTAGTAGGATTGGCGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042007 True 438 lncRNA 0.46 2 811600 817627

Neighbor

gene id symbol gene type direction distance location
XLOC_019923 cry3b coding upstream 2318 786556 ~ 809282 (+)
XLOC_019922 znf76 coding upstream 58208 737211 ~ 753392 (+)
XLOC_019921 zgc:162255 coding upstream 78261 724639 ~ 733339 (+)
XLOC_019920 gpr37l1a coding upstream 110495 696931 ~ 701105 (+)
XLOC_019919 elf3 coding upstream 146229 661505 ~ 665371 (+)
XLOC_019925 dennd2db coding downstream 18101 835728 ~ 856886 (+)
XLOC_019926 stk38b coding downstream 66051 883678 ~ 898645 (+)
XLOC_019927 NA coding downstream 105884 923511 ~ 938827 (+)
XLOC_019928 def6b coding downstream 161240 978867 ~ 996521 (+)
XLOC_019929 pparda coding downstream 180211 997838 ~ 1019152 (+)
XLOC_019910 NA non-coding upstream 502396 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 524411 219167 ~ 287189 (+)
XLOC_019902 NA non-coding upstream 751232 51545 ~ 60368 (+)
XLOC_019903 NA non-coding upstream 754860 53914 ~ 56740 (+)
XLOC_019901 NA non-coding upstream 783756 24421 ~ 27844 (+)
XLOC_019938 CU570769.1 non-coding downstream 432161 1249788 ~ 1267820 (+)
XLOC_019944 NA non-coding downstream 499125 1316752 ~ 1364861 (+)
XLOC_019947 BX322657.1 non-coding downstream 559704 1377331 ~ 1384069 (+)
XLOC_019963 AL954741.1 non-coding downstream 759236 1576863 ~ 1577746 (+)

Expression


Co-expression Network