XLOC_019902


Basic Information

Item Value
gene id XLOC_019902
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 51545 ~ 60368 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042002
GTTTTTCTGAAAATCGCCTCAGCCTCGCAGATGCCCGACAAACTACTGAAACACTGCGTTAAAGTCTGTTTGTTCACGGACATCCGTGTCACCGAGACGACGAGGAACAAATATTACTAACGGAACTCGATAAAAGCATGGCAATGTACGGGATAACAGGTGAGTTTGCAATGTCTTACCTGCCGTGGAGCCGCGGTGATTTTATCCGTTAACCAGAGGATTCaaacatcatacacacacacacacacacacagagagagagagagagagagagagagagagaggagacgGGGGTCTATCTGAGGACATGGGATGGATCGCAGGATACAGAACTGAACACAAAAAGAGTTCTGTGCAGCAGAGATAAAGCAACAGATCCGCTCGGCTCATCAGGGAGGGACTGATAGCGAGACTGGAAACAAGTCATGGCGGCACGCCTCATCAAGAGTCACTCAGCCCTCGCCGCCAGAACATCCATCACTGCACCGCATGTTc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042002 True 495 lncRNA 0.50 3 51545 60368

Neighbor

gene id symbol gene type direction distance location
XLOC_019901 NA coding upstream 23701 24421 ~ 27844 (+)
XLOC_019900 mfap2 coding upstream 27270 22888 ~ 24275 (+)
XLOC_019899 sdhb coding upstream 33321 11395 ~ 18224 (+)
XLOC_019905 zgc:112334 coding downstream 21431 81799 ~ 89987 (+)
XLOC_019906 nckipsd coding downstream 34324 94692 ~ 102265 (+)
XLOC_019907 slc25a20 coding downstream 45008 105376 ~ 109686 (+)
XLOC_019908 prkar2ab coding downstream 49790 110158 ~ 130695 (+)
XLOC_019909 NA coding downstream 158799 219167 ~ 287189 (+)
XLOC_019910 NA non-coding downstream 179800 240168 ~ 309204 (+)
XLOC_019924 NA non-coding downstream 751232 811600 ~ 817627 (+)
XLOC_019927 NA non-coding downstream 863143 923511 ~ 938827 (+)
XLOC_019938 CU570769.1 non-coding downstream 1189420 1249788 ~ 1267820 (+)

Expression


Co-expression Network