CI01000189_00297654_00300990 (FOSL2)


Basic Information

Item Value
gene id CI01000189_00297654_00300990
gene name FOSL2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 297654 ~ 301458 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_00297654_00300990.mRNA
AAGTACAGAATAGACATGCCTGGTTCTAGTAGTGCCTTTATTCCAACAATTAATGCCATAACGACCAGTCAGGACTTGCAGTGGATGGTTCAGCCCACAGTAATCACATCCATGTCTAATCCGTACTCCCGGCCTCACCCGTACGGCCTGTCTGTGTCTAGCGGCCCGGGCCTCCTCAGCCACACAGCTCTCACACGGCCCGGGGTCATCCGGTCCATCGGCGACGCCCGTGGTCGACGTAAGCGAGATGAGCAGTTTTATCTGCAGCTCACCCCAGAGGAAGAAGAAAAACGGAGAGTCAGGCGAGAAAGAAACAAACTAGCTGCAGCAAAATGTCGGAACCGCAGAAGAGAACTGACCGAGATGCTGCAAGGGGAAACTGAGAAGTTAGAGGAGGAGAAGGCTGACCTGCAGAAAGAAATCGAGACCCTGCAGAAGGAAAAGGACAAGTTGGAATTTATGTTGGTGGCCCACAACCCTGTGTGCAAACTGCCACTTGAAGAACGCCATCAGAGCTTGCACTCCCAGCAGTGTGCGCCCCTTTCTCTGACCATGCGTTCCAACCTGGGTCCCCGGGGTCCGATGAGTACTCTCAACCCAGTGGTGGTTAAACAGGAGCCTTTGGAAGATGACGACGACGATGAGGACGAAGAAAAAGCCCAGCATTCGGTCATCAAGCCCATCTGCCTAGGTGGCGGCATGTATTGCTCTGACGGAGACAGCCTCAACACGCCCGTGGTGGCTGCTTCCACCCCGGTGTCCACCCCGAACAACCCAAGCCTCATCTTCACATACCCCAGCATGCTCGAGCCCGAGAGCCCATCGCCCTCGTCGGAGTCCTGCTCCAAAGCCCACCGTCGGAGCAGCAGCAGCGGTGACCAATCATCAGATTCCCTGAATTCTCCCACCCTGTTGGCGCTTTGAAGGAAAATTCGACTTTCATCATTCTTGTGGATCTCCAGAGCACGCTCAGCTGGGATTTGAGTGGGGACTTCACCTCAACCAAGCTGAGAACCCTCAAGGGCTAATTTGCTCGTTTTATTTAAACGTTTCAGAAGAGAGTTTTTGTTGTCGTTGTTTAAATGTACGTGCGAATTCCACTTGCTATTTCAGTGGCGAGGTTTTGTAATGAAGACGAAAAAAGTTGGAGGAAACCGCTGTTCAGACCGCTTGGTATTTCCTGCTGACTAAAAAGCGAGGGGAATTGCTTGAAAATTGAATTCTTGATAGGTACAGAATCAGACATTGGACACTACGCCCTCAGAACGTCATTATCCTTGTATTTGTGACGTGTGAATATTGTCCCATTGTATTTTGTGTCTTGCTGTTTATAATATTTAGGGTTCACTGGATGAGCCTGACTGCTGAGTGTCGAAAGAACCATCTTGTATA

Function

symbol description
fosl2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within regulation of cardiac muscle cell myoblast differentiation. Predicted to be active in nucleus. Is expressed in head; presumptive bulbus arteriosus; presumptive cardiac ventricle heart tube; and trunk. Orthologous to human FOSL2 (FOS like 2, AP-1 transcription factor subunit).

GO:

id name namespace
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
K09030 FOSL2; fos-like antigen 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_00297654_00300990.mRNA True 1392 mRNA 0.51 3 297654 301458

Neighbor

gene id symbol gene type direction distance location
CI01000189_00183881_00277704 BRE, BRE.L coding upstream 19950 183881 ~ 277704 (+)
CI01000189_00086672_00092620 SLC4A1AP coding upstream 205034 86511 ~ 92620 (+)
CI01000189_00322834_00332685 MOCS1 coding downstream 21376 322834 ~ 332750 (+)
CI01000189_00438982_00445216 ASMT2 coding downstream 137524 438982 ~ 445645 (+)
CI01000189_00448469_00457564 JADE1 coding downstream 147011 448469 ~ 458185 (+)
CI01000189_00537167_00546397 NA coding downstream 235709 537167 ~ 547307 (+)
CI01000189_00552262_00553370 NA coding downstream 249375 550833 ~ 553486 (+)
G379481 NA non-coding upstream 14279 282954 ~ 283375 (+)
G379516 NA non-coding upstream 28760 267017 ~ 268894 (+)
G379515 NA non-coding upstream 112377 184928 ~ 185277 (+)
G379470 NA non-coding upstream 146239 146137 ~ 151415 (+)
G379482 NA non-coding upstream 154328 136040 ~ 143326 (+)
G379519 NA non-coding downstream 7520 308978 ~ 309182 (+)
G379556 NA non-coding downstream 106065 407523 ~ 407762 (+)
G379557 NA non-coding downstream 106615 408073 ~ 408311 (+)
G379558 NA non-coding downstream 107099 408557 ~ 408761 (+)
G379560 NA non-coding downstream 112782 414240 ~ 414491 (+)
G379600 NA other downstream 174157 475615 ~ 496908 (+)
G379799 NA other downstream 711088 1012546 ~ 1012903 (+)
CI01000189_00987665_01058757 PACRG other downstream 714573 987525 ~ 1059385 (+)
G381120 NA other downstream 2537763 2839221 ~ 2841125 (+)
G381491 NA other downstream 3324278 3625736 ~ 3626855 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011641 fosl2 coding NC_007128.7 CM002901.2 41302660 ~ 41318547 (+)
eurasian perch (Perca fluviatilis) G85631 LOC103353701,LOC102777822,LOC102194115 non-coding NC_053119.1 CM020916.1 17608426 ~ 17611533 (+)
mexican tetra (Astyanax mexicanus) G85659 fosl2,LOC107656746,LOC107726077,LOC107553732 non-coding NC_035905.1 CM008308.1 34222905 ~ 34226742 (-)