CI01000189_00527327_00527614


Basic Information

Item Value
gene id CI01000189_00527327_00527614
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 526280 ~ 527662 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_00527327_00527614.mRNA
AGGAAGAAGATTATAATCTAGAGAAGATCCATGGATTAACCAGTGAAGATGAGTCATGGAGTGAAAGAATGCAGAATACACCTGCTGAGCTTTAACAGCAGACACCTGCTGAAGAACAGAGAAGCGACTCGGCTAAGACAAATAATACGTGTCATTATGGCTTTAGTACACTGTAAAACACGCCTGCAAATGAAAGGATGGGGCAAAGGAGAGAAAGGGGCAAACGTGTATACAGCGGAGGAGGTAGAGAAGCAAAAAGTGCCCACAGTAACACAACAGGTTCAACCTGAACTGAATGCTAACAAAGGCTATGATTACAAGGTGCTGAAAAAATGAAGGAAGAGACAAACAAACAGAAAGAAAATGAAACGGGACCTTTTGTTCCGACGTGATGGCTTTTGAAAAGTCAGGGCTCATCGTGGAAAGCTCCTATTCCCCTGCGCCTCTGCGTCTGTCTATATGTCCATCTCTTCATCTGGATTAACCTCTCTTCACCACACAGAGAAGACGGTTAGCACAAGTCTGCACAAACAAACCATTATTGCATTAACACTGACCTAGACAAGTGACAACTTTACAAGAAAAGTCACACACTCACAATTAGGACATCCCATAGACTAAATCCTACCCCTGAATTTTTTTTTAATTTATTAATTTATATAATACATTATATACTTTATTTCATGTTATACTTTATTTTTAAATACTGTATTTTATTGTTTTTTAAGCATATACTTGTGAACTCATGCATATGCAAACCTAGAAATCATCATGTGCACACAAACACACTTTTACATGTACACACTCTTAAAAATGCTGGGTTTAAAACAACCCAAGTTGGGTTGCAAATGGACAAACCCAGCGACTGGGTGTCATTTTGACCCAGCGGTTAGGTTAAATGTTTGCCCAACCTGCTGGGTAGTTTTATTTAACTCAACTATTGTTTAAAAATTACTGTAATGCTTGCTTAATAAATGAACTATGTTTTTTAATATGTTTATGAAATGAATAATAATGAAACAATAAACATTTATTAAATTGCTCATTAATAAATGTTCACCTTTTGATTATTATTGTTGCTTCTACTAATCTGTGTCTGATTCTTAATTTCCAACCTATTTTGGGTTCATTTTAAGACAGCCATATAGTAATTTTTAAACAATAGTTGGGTTAAATAAAACTGCCCAGCACGTTGGGCAAACAACCGCTGGGTTCAAACAACCCAATCGCTGGGTTTGTCCATTTTCAGCCCAGCTTGGGTTGTTTTTAACCCAGCATCTTTTATGTGCATATGACATGTAATCAAGTAGATGTAAAGATTAAATCTATGCATGAAGTTCAAAATGGTATATTTAATCCTTTATGGGATGATGAAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_00527327_00527614.mRNA True 1383 mRNA 0.36 1 526280 527662

Neighbor

gene id symbol gene type direction distance location
CI01000189_00510737_00516326 NIPAL3 coding downstream 9945 509758 ~ 516335 (-)
CI01000189_00506407_00508897 NA coding downstream 17383 506355 ~ 508897 (-)
CI01000189_00496400_00496746 NA coding downstream 28932 495915 ~ 497348 (-)
CI01000189_00477967_00490706 RCAN3 coding downstream 35470 477673 ~ 492947 (-)
CI01000189_00461716_00469154 NA coding downstream 56982 461011 ~ 469298 (-)
CI01000189_00557254_00592764 CNKSR1 coding upstream 29541 557203 ~ 592764 (-)
CI01000189_00703680_00736690 NA coding upstream 175600 703262 ~ 736690 (-)
CI01000189_00744231_00759517 NA coding upstream 216441 744103 ~ 759517 (-)
CI01000189_00764790_00765233 ID3 coding upstream 237012 764674 ~ 765776 (-)
CI01000189_00797964_00824109 MSRA coding upstream 268988 796650 ~ 824109 (-)
G379943 NA non-coding downstream 222861 291768 ~ 303419 (-)
G379907 NA non-coding downstream 479077 46880 ~ 47203 (-)
G380066 NA non-coding upstream 69458 597120 ~ 597442 (-)
G380070 NA non-coding upstream 75857 603519 ~ 603731 (-)
G380071 NA non-coding upstream 77559 605221 ~ 605571 (-)
G380097 NA non-coding upstream 117626 645288 ~ 646111 (-)
G379933 NA non-coding upstream 150777 678439 ~ 679609 (-)
G380177 NA other upstream 366558 894220 ~ 898517 (-)
CI01000189_02961166_02963382 NA other upstream 2431446 2960570 ~ 2963454 (-)
G381317 NA other upstream 2471211 2998873 ~ 3006444 (-)
G382060 NA other upstream 3302965 3830627 ~ 3832613 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012151 NA non-coding NC_007128.7 CM002901.2 26950412 ~ 26968341 (-)