XLOC_011999 (fut9a)


Basic Information

Item Value
gene id XLOC_011999
gene name fut9a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 15631619 ~ 15657029 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023700
gaatgaattaactgcacacacactcacgcacgctcacgcacacgcacacacacacacacacacacgcacacgcacacactctctaAATCTATAATTGCATCCATGCACACGAGCAGCAGCAGCACTGACACTGGAAAGGTATCCGGGCGCGTGCGGGGAGGGGGACATTATTCTACATCACATCACACGCGGCGTTACATGGCGTCTTTCTCAGCGACGCACTTGCTCCGTTTCTGACCCACAGGATATGTGCATGTTTTGACTCGCACGCGCCGATCCGAGGTCTGTCACCATTGCGGACACATTGCAACATGCGGTGATGCTCTGACGCGAAGGCTATGGGTTCAGGTGCATCCTCTCCGAATATCATCCGAGGTCTTTCGGCACCATTCCGATATGCGTGAGTGTGTGGGATGTAAATAAGAGAAGCGCATGATGCGGCTTTCCCTCGAGGATGTTTGCTGATGGAGAGACTGACATTCATCTGGTTATAAAAAGAAGAAGCTGGGACATACAATCATTTTACCTTCTGGATATCAGCAAAACTGTCAGGCCAGAGTATGCCATCTCCACCAACTTACAGGATTCTACGACCCCTCCTGCTCGGTATCTTTCTGCTGGGATGCTTCGTGACTCTGTTTTTAATGTACATTAAACCATCAACAAGCTGGTTGTCCGGCCCCGTCGAGTCCGAAACCTCCACAGCCCGAGCGAAGAGCCTACTCTCCAATAGGAGCGACCAGAACCAGACCACCATCCTGGTATGGCTTTGGCCTTTTGGCGAAACCTACGACCTGAACGTCTGTAGCTCGCTATTCAGCATCGATGGCTGCTTCGTCACCGCCGACCGAAACCTTTACAACAAATCGGATGCTGTGGTCATCCATCACAGGGACATCACCAGCGACCTATCTAACATGCCGCCGGCGTATCGGCCCACGCTGCAAAGGTGGATCTGGATGAACTTTGAGTCGCCGTCACATTCGTCACAATTACCCGGAATTGAAAATTTGTTCAATTTGACTCTAAACTATCGGCAGGATGCTGATATAGAAGTGCCTTATGGATCGATCGTCGCAGCCCAAGGCGAGGAGGATTTTGTGCCACCAAGCAAAACCAAGCTCATCTGTTGGATCGTCAGCAACTGGAATCCGGATCACGTCCGAGTCAAATACTACAACGAATTGTACAAGCACATTGAGGTCCATGCATACGGACAGGCTTTTGGCGAGTACATCTCTGACCAGGACTACTTCCCGACAATCGCGAGCTGTAAGTTCTACCTGGCGTTTGAAAACTCCATTCACAAGGATTATATCACTGAAAAACTGTACAACCCACTTTCAGTCGGAACCGTGCCAGTGGTTCTCGGGCCACCAAGGGAGAACTATCAAAACTTTGTTCAGGGTAATGCGTTCATTCATGTGGATGATTTCCCGTCTCCAAAAGAGCTGGCTGATTACCTGCTGTTCCTGGACAAAAACGAGGAGCTCTACCTGAAGTACTTTGAGTGGCGCAAACACTTTAAGGTGAAAAAGGCATACTTTTGGGCCGAGCACACGTGTTTGGCCTGCGATTACGTCCGAAGGCACAATGAGTACAAGGCTATTAACAATCTTGATAAGTGGTACTGGGGTTAATCTGCACCTGATCCATTGGACCAGCTCATAATGAAAGTTGCTTGAAGAGGGTCTGTTGCAAGCACTTACagacttttatttttgtaaaacagCCCAAAGTAGATGTACAAATACTTTGTTGTTCGGTTTCATGCATTTAGGAATATGGATGTGAATCATGCATTTTTAAGGTTtactaagtacatttttatttattacaaagaaaaaaaagaattgaccaaaatgcatttaaaggggCAGTGCgcttaaaaaactaatttattcacCTTTCTGACTTCTGtggagcacaaaagaagatattcatgTAAGCAAATCCTGCATTTTATTGTTGAAGAAGTGATAAATGTACTAAAATGCCGGGTTGTTGCAACCCAatgttgggtaaaatatggataaACCTAATCGTTgggttaaaattgtaatttaaatgtaattcaatttttttttgactTTGTCCATATTTCACCCAATTTTGGGTAATGGCAACTTTTATTTTTAGAGTGTGTTTATTTGAAAGGCTGAATCTAAAAAAAACTTCttgctttaaatgcttttaaatgagataattcacccaaaaatcatgAACGAGGTGTTCCATTTTGGTATCtgcatcaaataaaatttacaaaagaCTTTTTATATACATAGAAAACATATTAAAAGCAAATAAAGAGGTTACTTTATAGTCTCAAATaacttttctaaaaataaaatgtaaaatatgggtAAAGTAACTTTATTATTTAGTAGTTATACAACAACCGTATTCTGACCGACACTTATTGTTTTATAAAAGAACAAGTGATCActgaattttttgatattttaaatgatttaaatcttACAAATGGGTAAAACATGAccgttaataatgtattttgcCCTGAaggtatatatttaaaaaaatgctgggttgttttaacccataGTTGtgtcaaatataaacaaaccaacccagactcattctaaaaacgtacccctaaatatatttctggagagcagcaaatacgtcccaggaggtacttttttttgcaggttttgttctTCATGAATCCCCAAGagactgctgtgtatgctttttgagatctcaaatttctctcgcgagtgccattcgtgcctgctgttctcacataaattcaccagaggctgctgttgactgactccCCCAACACCCACCCTCCcttcttaaacccaaccgatagtgttttctagTGATAGGTCGTTTTATGTGATTTAAGAAGTAGTATATCGTTCATTCGCACATGCGCAAATTTTTGCATGTGGAGTAGAAGAGTAGTTCAAGTCTTCTATCGTGTTTGATACATTCattcatcacgtgaaagacagaagccaatcatatgcatttagagccggaaaaagatttgatccgttcatttCTTGAGTCTCGAGGTTTGATTAatctctttacatgctgtcacatgatgaacgaatgactcaaaaacCAGAAGACTCGAATCATGGCTCCTTTCTGCTCAGACTGCGTGCATTGGTTAAGCTTACAACTCGTAacattaataattgttattaatatattttggcAAATGGGATGAAgagaagtttcataaactaatttcaagaggagcacaaAATATGATTGAACACAACTtgctgctcatctgtaatcagtaataatccaatcagattgatccaagcttACAACGAATGGACCAATTTTTCCCTACTgccttatcttcattttggaagaatcccctcttTCAGCCCATCTTTTTTTCCTCCCTTTTTTAAGGGGAGCTCTTGAGACTAAACTGATCTCAGATCTCCTATATGCTTATTAACCAggtgggagccttgggctcaattatttccgagctcagggttctttcccgggacagcatgacaaacctGCTATTAATGCCAAGCACATCTAattgggaactcttgaaatgacaaaatgacttgaaaaaagatttgttgatcttaatgaacgagactcaaacTCAAAACAgtctgagtcagtaaaatgattaaaacttcccatcactagcaCCGGTTGACCagagcccacccacttccctaaacccaaccggctgtttttgcaaaaaaaaaaaaaaaaagccagaaaaagccattttaccacattctcaccgttatttacttgtttattttgttttttggcttttgtcttacctgctttctgggtCTTTTCTTTGCCATACTTAAACCACGTTATTATAATCAACTCCACTCCACATTACAAGTCCATTGACGtatgccaggggtgtccaaactcggtcctggagggccggtgtcctgaagagttttgctccaaccttaatcaaacacacctgaaccagctaatcaaggtcttactagatatactagaaaattcttggcaggtgtgttgaagcaagatggagctaaactcagtttggacacccctgacgtATGCGGTGAGCAACTGAACAAACTAGTAACAGaggaaaagccgtccataaggagattagcggtcagctggtaagtgtgaaaagaaACGGCATTAAACTAACCTgtaacattcattttaaagataaaatgcagccatacgtacctctggctacataatccacaatctccagaaatgtctttagggctacgttttcagaatgttgGGACAAACACAATCATTTGGTTGTTTAATTGACAAAAATCACCCAGCATTTGTAAGTAAGCTAACTTTTATGCGTGCAAAATTCAAAGTTCAACAAAAGGTGAAATTTCTGCCATCATTTGACATTCCAAAGTTTCTTTTCCAGGAATATACTTAAAAAACAAGTTGGTTCAACTGTATTTGCCTATACAATTACAGTCAATGGTATCCAAAATGGCACACtcaaaaagaaatgtttttaaagtatttttaatcgtgttcagcagaagaaagctCTACTTTTTGCATCAATTtgactaaacaaaaaaataatgatttgcttctgggtgaactagccctttaaaatTTCATACTcatcatacaaaaaaaacaatcctGTCCATTTAATGTGAAAACCGAGCACTTTCTAAAACAGatttttaagctttatttataTATCATTGGTTATTGTGTAAATGTTAGTGCTAGAGTCATCTATGCAGTGTTTACAGAACTCATGTTGTGCAAAATGTCTATGTactgtaaatgtaatgtgtatagTATGTATTTTGAGACGACCTGCCTTTCATTTCCATagtttttggatgtttttttatgCACTCTCATCATTTACTATGCCATATAAATGGACACCGCAGTGACCAACGTGCATTCGCTACTGGAATACAAACACACCAGGAGTCCACCGTTGCTGATAATGTTTTTATCGTACTGAATAACTGCTTATAATAAGTACAGTAGCTTCCATGGCTTGGATATGCGATACTGTTAAAGTATCAATGTGTGCtgtgaaatatttaaatgttactttagttTAACAGTGAAGTGTTGAGTCAAGAGCAGGAGGCTAATATACATAGTCATGTGTGGGTGGTGCCATATTCACAAGAATGCAGACAACTTTTTCCCAAATGTTGCCAAATGATTAGACGTGCTCGGATGTACCAGACAAATGAAATCATTATGTGAGAAATATAACGACTCTCCTTCCTAATCCTGAAGTTGCTTAGAACATTTGTTCGCTGCCaaagttttcatttgttttcatacTGATCTTTTATCTCTGGGATTCACAGCATCGCATTTCTCAGCACAGCTTTCATTTCGTGGTGAAGGACTGTTTTCGAACATGTACGTCAGGCTAATATTAGATGAGGGCGAAGAACTCTGTTATTGATCAGTGAGGATGTTTTTTCAGCTGAGCAGATGATACTGTCGTGTTCTTATTTGCAGTAAAAGCTCTAAACATCCTTAaaacaagattttattttttttttttacctcagatgTAATTAGACCATTTTTATTATTGGTGTATTGTATAAATCATACTTAATTTGACAAGTTATCTTACCTAAATATGTAAATTCAtcctaattaattaaatacatttatttggcagaacaaaacaaacaaaatgtgcattttttctctcgttttaaatgtaaaataatctaaaaatcttttttgaatTTGGCAATTTTACTTGTTTTCTATGTAATTGTAATTACTCAGTACTCATTTACACTGCATTTTTGGTCTCTAAACATgcaaaatttgttaaaaaatgatACCATTATGATACCATGAAAATGGTGACATCAGGTGCATGCATATTATGTTTGACTTATTAATAATCAGCagccgatttgaatgttatcactcgattaaatgggtgttatcagtggttatcagctgatagatatgggccagtaggggccttctgtgcctactagtaCTAGTTGTCATCCATCCAAATGGATAATTATCTATAGATTACATACGGCTGCATCcaaaagttaacaagaattatttatattatttattaaatttcccattttattgtattttattaatgtctacccctaccccaacccaaccgtcacattaatgtaaaaacacatCTGGATCTGGAgacttctctattagtatagctgattaaccacgagaattatttatattatctattacaTTTGccataatttgtattttattaacgtctacccctaccccaaacctaaaccccaatcatcacagtaatgtaaaaacaaatgtgtACATAGAGTTTTCTCTATTAGTATACCTGATAGAGCGGATGGCCCCTACTGGcttatatctatcagctgataaccacttatAACGCCCACTCAAtggagtgataacattcgaagcgggtgCAGCCACAACAATGATACAGGACCGTGCTTACATTATGTGCATATGCACATAGAGATTCATTACAAAGTAACGCCACCTACTTGCCTGCTATATGTCTAATAAcagcattttaattgtttttccagATGCATAAGAATGGGAATTATTTTATCTGCtgattttattgaatttaaaaaaacacaaagtaaACTCTTGTGCAGTTTTAAATACATTGTTGTTGTGTAAACATACAGCAAGATATACAGGGTGTGTTAACAGTAAGTAGGCATTAAAATAGGTAATAAAGTCAATTTTTTTAATACTGcatttcatattaatattttaatcatgaCTCCAGTGATACTACAAGTCAAAATCATAACTTTTGGCATAGTTACTTTTCACCCATTCTGCATATTTTACGAATCGAACTATTGCTATCGCAAACATCTGGAATGCATGTCAATTTGTACATCGGTGCTGTAAATGATGTATTCTGTCTTAATTGAGTCTTaatttattatacacaattttgATTTTCAAGCAAATGTATTTCCTTTTAAAGAtatctctatttatttatttatttgtttgtttggaaaGTAAGACGTTAATTTATAAGCATCTTATTTTTTGAATGCTTTTTCGAAAATGCATACTTTAAGTAAGAAAAAATGTACATGCAGCCGGTTGTTCAGCTGGATAtacattatcctgcttattacatgacTAATTGCTAAAAAAACTAATTAGAGACACTATCCATTGATTTGagtcataatattttactagctcTTCTATTATACATCAAGCTTGCAAAAAGCTCAGATACAtactagggttgtcacaatactggaattcagtaccaatcaatactgaagttttaaaaacgtccaatTTCTGCAAGCATTTAAGCTCTACTGAtcacgttcttaaacagcactAATTTGTCATTGTGCTTAACGgtaatgactgtgattggccgtgaaggtcatcggttTACCAAACTTatcactgtttactgagtgttaccacagatacagggacactggagcgttttaaaatcacgtcgatcagctggtttgtctacaAGCTAACTTAAGAGCAACCCGCTAATGAAtcacggctttaaaacgctccagtgtccctgttacactcagtaaacagtggtgaattcagtgaactgatgacctatactgccaatcacagtcatttctgttgagcatgtgaacacaacagAAAAATCAGCAGCATTTAAGAATGTGCTTAATAGCACTCAAATGTTAGAAAGAAATGGCcgtttttaaaattccagtatcgatcaatagtatctggatgcagcctttatgatgcaagcggAGATTGTATCATTCAGCATTGCAATGTcaaacacaatgcactcaaatggagctagtggtgtcactgtgatgggtagggttaggggtggggttaggtgagcccattaaaaagcattggatgcagctcagattgcactgcaccaggtctgcatccagacccctctcttatcgattggtatcgaattcaaGTATTGTGCAACccttcacacacatatacatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagcctGTTATTAGATTCAGCGGCTGTTATCTGAGAATAACATGCTATaaatgaccaatcagaatcaagttttCCAGTATGCCTTGTAATAATTGGTGATAATATTTTGCACATCATGTAAAATCATCTTTCCTTGGTTTTAACACTTGTTTTGACATCAGAAGCACACACGGTTGTGgcttgttgctgttgttgtgcTTTAATGTCAGTCCAATATAAACACTGACACCAATGCTTCAATATTTCACGTCTGGGGGTTTTTAACTTTTCTACTCATGAGGGACCatcagttttgtttagttttttgactATTTTACAAATGTCCATCTGTATATTACTGAAACGTGCACTCTTCAATGAGCCAGACTTTTTCTTAAATATGAACTCTGAAAAAAAACAGAGATGATGTGTGGTAATGCAAGCTGCGCTCCACACCACAAATCAGTGTTTGTCCAAGATGATCAGTTGGCCGTGAATGCTCTTTATGCATTGTAAATAGCCGTATTGTTGGATGATCTCAAATCTGTAGTGAATGCCATGAGGATGAAGCGCTGAAATGAGACAGACAAAGTAAGCCCTTTGCACCGAGGAAGAAAAGTCTCCCGCCGAAGACAAAGATGACAGTGTTATGGAGAAGCCACTTTCTGTTCTCACAATGAACATTCGTatcgtttttttatattttggggggCGGGATTAGAAACTAGCAAACACTGCTGATGAAAGTCTGTGATTTATTGACGCTACGAAGATGCATTGTGACTAATGTGAAATAAGAAAGAGCTGTTTATGTACAAAGTGAATCAGAGATCGCTTATTTACTGACTTGTATTGATTTGTGGTCTCTCTCCACCTCTGTATCTTTATCTCTTGTACACAAATGTTGGCTGTGCGCTCTTGTACCCTTTAAAACAGCCTTTGCATTATGAGAGTGACTCAGAGCCCGTGTTGACTCACATATGTAGGCTGGTCGCATTGATGCTGGTGTTTCCGTTGCCGAAATGTGCACCCCTGTCAATTTATGCACTCAATTCGCTACCCGATTGCCACAATTACCACCACCCTATCCCGTATACTCGATGCTTAATCTGGCAGGGGTGCATTTTCTCCACCAGTACAACAACAGCATGGAGTTTGATATCTCCTCTATGCATTATAGGTACTTGAATGCGAAATGGACCCACATTCCTGTCGTGCTGAGGAAGTCGAGGGTGTATAGAACTGTTCATTTCAACGTTAATTGCCAAAACATtgttatttgccaaatgatttaCTTGTAGGTGTCTGTTAGTAAAATAAAGAGATGAAAATAAAATTACGTTCACAGAA
>TCONS_00023701
TTGTCTGCTTCCCACCCAAAGGCCAGAGTATGCCATCTCCACCAACTTACAGGATTCTACGACCCCTCCTGCTCGGTATCTTTCTGCTGGGATGCTTCGTGACTCTGTTTTTAATGTACATTAAACCATCAACAAGCTGGTTGTCCGGCCCCGTCGAGTCCGAAACCTCCACAGCCCGAGCGAAGAGCCTACTCTCCAATAGGAGCGACCAGAACCAGACCACCATCCTGGTATGGCTTTGGCCTTTTGGCGAAACCTACGACCTGAACGTCTGTAGCTCGCTATTCAGCATCGATGGCTGCTTCGTCACCGCCGACCGAAACCTTTACAACAAATCGGATGCTGTGGTCATCCATCACAGGGACATCACCAGCGACCTATCTAACATGCCGCCGGCGTATCGGCCCACGCTGCAAAGGTGGATCTGGATGAACTTTGAGTCGCCGTCACATTCGTCACAATTACCCGGAATTGAAAATTTGTTCAATTTGACTCTAAACTATCGGCAGGATGCTGATATAGAAGTGCCTTATGGATCGATCGTCGCAGCCCAAGGCGAGGAGGATTTTGTGCCACCAAGCAAAACCAAGCTCATCTGTTGGATCGTCAGCAACTGGAATCCGGATCACGTCCGAGTCAAATACTACAACGAATTGTACAAGCACATTGAGGTCCATGCATACGGACAGGCTTTTGGCGAGTACATCTCTGACCAGGACTACTTCCCGACAATCGCGAGCTGTAAGTTCTACCTGGCGTTTGAAAACTCCATTCACAAGGATTATATCACTGAAAAACTGTACAACCCACTTTCAGTCGGAACCGTGCCAGTGGTTCTCGGGCCACCAAGGGAGAACTATCAAAACTTTGTTCAGGGTAATGCGTTCATTCATGTGGATGATTTCCCGTCTCCAAAAGAGCTGGCTGATTACCTGCTGTTCCTGGACAAAAACGAGGAGCTCTACCTGAAGTACTTTGAGTGGCGCAAACACTTTAAGGTGAAAAAGGCATACTTTTGGGCCGAGCACACGTGTTTGGCCTGCGATTACGTCCGAAGGCACAATGAGTACAAGGCTATTAACAATCTTGATAAGTGGTACTGGGGTTAATCTGCACCTGATCCATTGGA

Function

symbol description
fut9a Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Orthologous to human FUT9 (fucosyltransferase 9).

GO:

id name namespace
GO:0036065 fucosylation biological_process
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008417 fucosyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016757 transferase activity, transferring glycosyl groups molecular_function
GO:0046920 alpha-(1->3)-fucosyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080723-75 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Orthologous to human FUT9 (fucosyltransferase 9).

Ensembl:

ensembl_id ENSDARG00000016460

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023700 False 9380 mRNA 0.38 3 15631619 15657029
TCONS_00023701 True 1129 mRNA 0.49 1 15639339 15640467

Neighbor

gene id symbol gene type direction distance location
XLOC_011998 fhl5 coding downstream 19875 15605572 ~ 15611744 (-)
XLOC_011997 si:ch211-266g18.9 coding downstream 31067 15580665 ~ 15600552 (-)
XLOC_011996 col10a1a coding downstream 84757 15542077 ~ 15546862 (-)
XLOC_011995 fyna coding downstream 103022 15502964 ~ 15528597 (-)
XLOC_011994 si:ch211-266g18.10 coding downstream 133344 15449401 ~ 15498275 (-)
XLOC_012000 manea coding upstream 1838 15658867 ~ 15667285 (-)
XLOC_012001 NA coding upstream 84472 15741501 ~ 15743996 (-)
XLOC_012002 cx52.7 coding upstream 87061 15744090 ~ 15747296 (-)
XLOC_012003 ankrd6a coding upstream 99799 15756828 ~ 15777350 (-)
XLOC_012004 CR759878.1 coding upstream 225037 15882066 ~ 15899463 (-)
XLOC_011993 NA non-coding downstream 202781 15415718 ~ 15428838 (-)
XLOC_011991 NA non-coding downstream 326696 15302837 ~ 15304923 (-)
XLOC_011986 NA non-coding downstream 512101 15111493 ~ 15119518 (-)
XLOC_011985 NA non-coding downstream 582241 15040835 ~ 15049378 (-)
XLOC_011973 FP017160.1 non-coding downstream 1369081 14262422 ~ 14262538 (-)
XLOC_012006 NA non-coding upstream 420806 16077835 ~ 16087935 (-)
XLOC_012008 NA non-coding upstream 535450 16192479 ~ 16193620 (-)
XLOC_012012 NA non-coding upstream 907849 16564878 ~ 16568991 (-)

Expression


Co-expression Network